Information for 18-GCACTGGGGTATC (Motif 28)

A C T G A G T C C T G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A C G A T A G T C
Reverse Opposite:
C T A G C G T A A C G T C G T A A G T C A G T C A G T C A G T C C G T A A C T G A G C T A C T G A G T C
p-value:1e-5
log p-value:-1.157e+01
Information Content per bp:1.946
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.3 +/- 28.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0162.1_Six2/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GCACTGGGGTATC------
--AATGGGGTATCACGTTT
 A C T G A G T C C T G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCACTGGGGTATC------
--GATGGGGTATCATTTTT
 A C T G A G T C C T G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCACTGGGGTATC------
--AATAGGGTATCATATAT
 A C T G A G T C C T G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCACTGGGGTATC------
--AATAGGGTATCAATTAT
 A C T G A G T C C T G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Six3/MA0631.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCACTGGGGTATC------
--GATAGGGTATCACTAAT
 A C T G A G T C C T G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCACTGGGGTATC------
--GATAGGGTATCACTAAT
 A C T G A G T C C T G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCACTGGGGTATC------
--AATAGGGTATCAATATT
 A C T G A G T C C T G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCACTGGGGTATC----
GCTGGGGGGTACCCCTT
 A C T G A G T C C T G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A C G A T A G T C A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCACTGGGGTATC
TGCCCNGGGGCA--
 A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A C G A T A G T C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACTGGGGTATC
TGCCCTNGGGCA--
 A C G T A C T G A G T C C T G A A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G T A C G A T A G T C
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T