Information for 17-ACAGCCCGCGGTG (Motif 27)

C G T A A G T C C T G A A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G C G A T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C A C T G A G T C C T A G A C T G A C T G A G T C A G C T A C T G A C G T
p-value:1e-5
log p-value:-1.157e+01
Information Content per bp:1.924
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 27.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC4/MA0751.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCCGCGGTG-
GACCCCCCGCTGTGC
 A C G T C G T A A G T C C T G A A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G C G A T A C T G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCCGCGGTG-
GACCCCCCGCTGCGC
 A C G T C G T A A G T C C T G A A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G C G A T A C T G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCCGCGGTG
GACCCCCCGCTGTG
 A C G T C G T A A G T C C T G A A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G C G A T A C T G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

GLIS2/MA0736.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCCGCGGTG
GACCCCCCGCGAAG
 A C G T C G T A A G T C C T G A A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G C G A T A C T G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ACAGCCCGCGGTG-
----CCTGCTGAGH
 C G T A A G T C C T G A A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCCGCGGTG-
GGCCYCCTGCTGDGH
 A C G T C G T A A G T C C T G A A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G C G A T A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAGCCCGCGGTG---
-NNTCCTGCTGTGNNN
 C G T A A G T C C T G A A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G C G A T A C T G A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAGCCCGCGGTG
-CCCCCTGCTGTG
 C G T A A G T C C T G A A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G C G A T A C T G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACAGCCCGCGGTG--
ATTGCCTGAGGCAAT
 C G T A A G T C C T G A A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G C G A T A C T G A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACAGCCCGCGGTG--
ATTGCCTGAGGCGAA
 C G T A A G T C C T G A A C T G A G T C A G T C A G T C A C T G A G T C A C T G A C T G C G A T A C T G A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A