Information for 10-TCTGYGKGACCTC (Motif 19)

A G C T A G T C A C G T C A T G G A C T C T A G A C G T A C T G C T G A A T G C A G T C A G C T T A G C
Reverse Opposite:
A T C G C T G A A C T G A T C G A G C T G T A C G T C A G A T C C T G A G T A C C G T A C T A G C T G A
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.698
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif6.10%
Number of Background Sequences with motif320.0
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets49.1 +/- 21.7bp
Average Position of motif in Background50.1 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCTGYGKGACCTC
AGGNCANNGTGACCT-
 A C G T A C G T A C G T A G C T A G T C A C G T C A T G G A C T C T A G A C G T A C T G C T G A A T G C A G T C A G C T T A G C
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TCTGYGKGACCTC
------TGACCT-
 A G C T A G T C A C G T C A T G G A C T C T A G A C G T A C T G C T G A A T G C A G T C A G C T T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TCTGYGKGACCTC
-----GTGACCTT
 A G C T A G T C A C G T C A T G G A C T C T A G A C G T A C T G C T G A A T G C A G T C A G C T T A G C
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TCTGYGKGACCTC-
------TGACCTYA
 A G C T A G T C A C G T C A T G G A C T C T A G A C G T A C T G C T G A A T G C A G T C A G C T T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:TCTGYGKGACCTC-
------TGACCYCT
 A G C T A G T C A C G T C A T G G A C T C T A G A C G T A C T G C T G A A T G C A G T C A G C T T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGYGKGACCTC
TGACCTTTANTTGACCT-
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T C A T G G A C T C T A G A C G T A C T G C T G A A T G C A G T C A G C T T A G C
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCTGYGKGACCTC
CAGGTCACCGTGACCTT
 A C G T A C G T A C G T A C G T A G C T A G T C A C G T C A T G G A C T C T A G A C G T A C T G C T G A A T G C A G T C A G C T T A G C
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TCTGYGKGACCTC---
------TGACCTTGAT
 A G C T A G T C A C G T C A T G G A C T C T A G A C G T A C T G C T G A A T G C A G T C A G C T T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTGYGKGACCTC
GGTCANNGTGACCTN
 A C G T A C G T A G C T A G T C A C G T C A T G G A C T C T A G A C G T A C T G C T G A A T G C A G T C A G C T T A G C
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGYGKGACCTC
TGACCTTTGCATGACCT-
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T C A T G G A C T C T A G A C G T A C T G C T G A A T G C A G T C A G C T T A G C
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T A C G T