Information for 8-CCCAMTGTCYTGATCT (Motif 17)

G T A C G T A C A G T C G T C A G T A C C G A T C T A G A C G T G A T C A G C T A C G T T A C G G C T A C A G T A T G C A G C T
Reverse Opposite:
C T G A T A C G G T C A C G A T A T G C G T C A T C G A C T A G G T C A A G T C G C T A C A T G A C G T A C T G C A T G A C T G
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.640
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif40.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets65.2 +/- 20.6bp
Average Position of motif in Background60.0 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCCAMTGTCYTGATCT
-CCATTGTTTT-----
 G T A C G T A C A G T C G T C A G T A C C G A T C T A G A C G T G A T C A G C T A C G T T A C G G C T A C A G T A T G C A G C T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCAMTGTCYTGATCT
-CCATTGTTYB-----
 G T A C G T A C A G T C G T C A G T A C C G A T C T A G A C G T G A T C A G C T A C G T T A C G G C T A C A G T A T G C A G C T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCAMTGTCYTGATCT
TGTTCCCATTGTGTACT---
 A C G T A C G T A C G T A C G T G T A C G T A C A G T C G T C A G T A C C G A T C T A G A C G T G A T C A G C T A C G T T A C G G C T A C A G T A T G C A G C T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCCAMTGTCYTGATCT
-CCTTTGTT-------
 G T A C G T A C A G T C G T C A G T A C C G A T C T A G A C G T G A T C A G C T A C G T T A C G G C T A C A G T A T G C A G C T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCAMTGTCYTGATCT
NCCATTGTTC------
 G T A C G T A C A G T C G T C A G T A C C G A T C T A G A C G T G A T C A G C T A C G T T A C G G C T A C A G T A T G C A G C T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCAMTGTCYTGATCT-
NNCTTTGTTTTGNTNNN
 G T A C G T A C A G T C G T C A G T A C C G A T C T A G A C G T G A T C A G C T A C G T T A C G G C T A C A G T A T G C A G C T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCCAMTGTCYTGATCT
NCCATTGTTY------
 G T A C G T A C A G T C G T C A G T A C C G A T C T A G A C G T G A T C A G C T A C G T T A C G G C T A C A G T A T G C A G C T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCCAMTGTCYTGATCT
CTCATTGTC-------
 G T A C G T A C A G T C G T C A G T A C C G A T C T A G A C G T G A T C A G C T A C G T T A C G G C T A C A G T A T G C A G C T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCCAMTGTCYTGATCT
-CCWTTGTYYB-----
 G T A C G T A C A G T C G T C A G T A C C G A T C T A G A C G T G A T C A G C T A C G T T A C G G C T A C A G T A T G C A G C T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCCAMTGTCYTGATCT
-CCATTGTTC------
 G T A C G T A C A G T C G T C A G T A C C G A T C T A G A C G T G A T C A G C T A C G T T A C G G C T A C A G T A T G C A G C T
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T