Information for 1-CAATATGTCC (Motif 13)

A G T C C G T A C G T A C G A T T C G A A C G T A C T G C G A T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C C G T A A G C T C G T A A C G T A C G T A C T G
p-value:1e-9
log p-value:-2.263e+01
Information Content per bp:1.898
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif53.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets60.9 +/- 21.3bp
Average Position of motif in Background48.2 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CAATATGTCC--
GRACAGWMTGTYCTB
 A C G T A C G T A C G T A G T C C G T A C G T A C G A T T C G A A C G T A C T G C G A T A G T C A G T C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

Neurog1/MA0623.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAATATGTCC
ACCATATGGT-
 A C G T A G T C C G T A C G T A C G A T T C G A A C G T A C T G C G A T A G T C A G T C
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAATATGTCC--
GAACADWATGTTCTT
 A C G T A C G T A C G T A G T C C G T A C G T A C G A T T C G A A C G T A C T G C G A T A G T C A G T C A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAATATGTCC
RCCATMTGTT-
 A C G T A G T C C G T A C G T A C G A T T C G A A C G T A C T G C G A T A G T C A G T C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAATATGTCC--
GGTCANNGTGACCTN
 A C G T A C G T A C G T A G T C C G T A C G T A C G A T T C G A A C G T A C T G C G A T A G T C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAATATGTCC--
GVACAGNMTGTYCTB
 A C G T A C G T A C G T A G T C C G T A C G T A C G A T T C G A A C G T A C T G C G A T A G T C A G T C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

ESR2/MA0258.2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CAATATGTCC-
AGGNCANNGTGACCT
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G A T T C G A A C G T A C T G C G A T A G T C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

NR3C2/MA0727.1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAATATGTCC--
GGGAACACAATGTTCCC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G A T T C G A A C G T A C T G C G A T A G T C A G T C A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CAATATGTCC--
AGNACANNNTGTNCTN
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G A T T C G A A C G T A C T G C G A T A G T C A G T C A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAATATGTCC--
AGNACAGNCTGTTCTN
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G A T T C G A A C G T A C T G C G A T A G T C A G T C A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T