Information for 1-CCCTCTCATGCCA (Motif 1)

A G T C A G T C G T A C A C G T A T G C A C G T A G T C C G T A A G C T A C T G G T A C G T A C C G T A
Reverse Opposite:
C G A T A C T G A C T G A G T C C T G A A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C T G
p-value:1e-13
log p-value:-3.200e+01
Information Content per bp:1.903
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.8 +/- 20.4bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTCATGCCA
AGCCACTCAAG---
 A C G T A G T C A G T C G T A C A C G T A T G C A C G T A G T C C G T A A G C T A C T G G T A C G T A C C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCTCATGCCA
NNAGTCCCACTCNNNN--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A T G C A C G T A G T C C G T A A G C T A C T G G T A C G T A C C G T A
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTCATGCCA
CRCCCACGCA-----
 A C G T A C G T A G T C A G T C G T A C A C G T A T G C A C G T A G T C C G T A A G C T A C T G G T A C G T A C C G T A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCCTCTCATGCCA
-GCTGTCAA----
 A G T C A G T C G T A C A C G T A T G C A C G T A G T C C G T A A G C T A C T G G T A C G T A C C G T A
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCCTCTCATGCCA
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A T G C A C G T A G T C C G T A A G C T A C T G G T A C G T A C C G T A
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCCTCTCATGCCA
-CCTGTCAA----
 A G T C A G T C G T A C A C G T A T G C A C G T A G T C C G T A A G C T A C T G G T A C G T A C C G T A
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CCCTCTCATGCCA-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A T G C A C G T A G T C C G T A A G C T A C T G G T A C G T A C C G T A A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------CCCTCTCATGCCA
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A T G C A C G T A G T C C G T A A G C T A C T G G T A C G T A C C G T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCCTCTCATGCCA-
TCCCAGMCRAGCCCC
 A C G T A G T C A G T C G T A C A C G T A T G C A C G T A G T C C G T A A G C T A C T G G T A C G T A C C G T A A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCCTCTCATGCCA
TCCGCCCCCGCATT---
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A T G C A C G T A G T C C G T A A G C T A C T G G T A C G T A C C G T A
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T A C G T