Information for 4-GGGGAAGCAACAT (Motif 7)

C T A G A C T G A C T G A C T G G T C A C G T A A C T G G T A C C G T A C T G A A G T C C G T A C G A T
Reverse Opposite:
C G T A A C G T A C T G A G C T A C G T A C T G A G T C A C G T A C G T A G T C G T A C G T A C A G T C
p-value:1e-11
log p-value:-2.618e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.3 +/- 23.2bp
Average Position of motif in Background25.8 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGGGAAGCAACAT--
ADGGYAGYAGCATCT
 C T A G A C T G A C T G A C T G G T C A C G T A A C T G G T A C C G T A C T G A A G T C C G T A C G A T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGGGAAGCAACAT
--NGAAGC-----
 C T A G A C T G A C T G A C T G G T C A C G T A A C T G G T A C C G T A C T G A A G T C C G T A C G A T
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGGGAAGCAACAT--
---AAACAAACATTC
 C T A G A C T G A C T G A C T G G T C A C G T A A C T G G T A C C G T A C T G A A G T C C G T A C G A T A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGGGAAGCAACAT----------
---GAAGTANCACGAATNMRAGT
 C T A G A C T G A C T G A C T G G T C A C G T A A C T G G T A C C G T A C T G A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAGCAACAT
TGGGGA--------
 A C G T C T A G A C T G A C T G A C T G G T C A C G T A A C T G G T A C C G T A C T G A A G T C C G T A C G A T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAGCAACAT
TGGGGAAGGGCM--
 A C G T C T A G A C T G A C T G A C T G G T C A C G T A A C T G G T A C C G T A C T G A A G T C C G T A C G A T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGGGAAGCAACAT
TTAAGAGGAAGTTA---
 A C G T A C G T A C G T A C G T C T A G A C T G A C T G A C T G G T C A C G T A A C T G G T A C C G T A C T G A A G T C C G T A C G A T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAGCAACAT
GGATGATGCAATA-
 A C G T C T A G A C T G A C T G A C T G G T C A C G T A A C T G G T A C C G T A C T G A A G T C C G T A C G A T
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A A C G T

SPIC/MA0687.1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GGGGAAGCAACAT
AAAAAGAGGAAGTA----
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G A C T G G T C A C G T A A C T G G T A C C G T A C T G A A G T C C G T A C G A T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGGGAAGCAACAT----
----ATGCAACAGGTGG
 C T A G A C T G A C T G A C T G G T C A C G T A A C T G G T A C C G T A C T G A A G T C C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G