Information for 4-GCATTTGTCA (Motif 3)

C T A G A T G C C T G A A C G T A C G T C G A T A T C G A C G T A T G C G T C A
Reverse Opposite:
A C G T A T C G G T C A A T G C G C T A T G C A T G C A G A C T A T C G A G T C
p-value:1e-14
log p-value:-3.393e+01
Information Content per bp:1.703
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.06%
Number of Background Sequences with motif598.9
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets50.9 +/- 25.7bp
Average Position of motif in Background49.3 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GCATTTGTCA-
----NTGTCAN
 C T A G A T G C C T G A A C G T A C G T C G A T A T C G A C G T A T G C G T C A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

JUND/MA0491.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCATTTGTCA--
-NATGAGTCACN
 C T A G A T G C C T G A A C G T A C G T C G A T A T C G A C G T A T G C G T C A A C G T A C G T
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCATTTGTCA---
-NATGASTCABNN
 C T A G A T G C C T G A A C G T A C G T C G A T A T C G A C G T A T G C G T C A A C G T A C G T A C G T
A C G T C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCATTTGTCA----
NNAATTAGTCACGGT
 A C G T C T A G A T G C C T G A A C G T A C G T C G A T A T C G A C G T A T G C G T C A A C G T A C G T A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCATTTGTCA--
NNATGASTCATH
 C T A G A T G C C T G A A C G T A C G T C G A T A T C G A C G T A T G C G T C A A C G T A C G T
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCATTTGTCA
---TGAGTCA
 C T A G A T G C C T G A A C G T A C G T C G A T A T C G A C G T A T G C G T C A
A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCATTTGTCA-
-GATGAGTCAT
 C T A G A T G C C T G A A C G T A C G T C G A T A T C G A C G T A T G C G T C A A C G T
A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCATTTGTCA--
--ATGASTCATY
 C T A G A T G C C T G A A C G T A C G T C G A T A T C G A C G T A T G C G T C A A C G T A C G T
A C G T A C G T T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

FOSL1/MA0477.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCATTTGTCA--
-NATGAGTCACC
 C T A G A T G C C T G A A C G T A C G T C G A T A T C G A C G T A T G C G T C A A C G T A C G T
A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

NFE2/MA0841.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCATTTGTCA--
-GATGAGTCATN
 C T A G A T G C C T G A A C G T A C G T C G A T A T C G A C G T A T G C G T C A A C G T A C G T
A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G