Information for 8-TCTCTGCTGC (Motif 13)

G A C T A G T C A G C T A G T C C G A T A T C G A G T C A C G T A C T G T G A C
Reverse Opposite:
A C T G G T A C G T C A A C T G T A G C C G T A T C A G T C G A C T A G C T G A
p-value:1e-8
log p-value:-2.071e+01
Information Content per bp:1.840
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.06%
Number of Background Sequences with motif884.4
Percentage of Background Sequences with motif1.83%
Average Position of motif in Targets51.6 +/- 25.1bp
Average Position of motif in Background50.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTGCTGC-
CCCCCTGCTGTG
 A C G T G A C T A G T C A G C T A G T C C G A T A T C G A G T C A C G T A C T G T G A C A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCTCTGCTGC-
-CGCAGCTGCG
 G A C T A G T C A G C T A G T C C G A T A T C G A G T C A C G T A C T G T G A C A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCTCTGCTGC-
---CAGCTGNT
 G A C T A G T C A G C T A G T C C G A T A T C G A G T C A C G T A C T G T G A C A C G T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCTCTGCTGC--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T G A C T A G T C A G C T A G T C C G A T A T C G A G T C A C G T A C T G T G A C A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTGCTGC----
TCNCCTGCTGNGNNN
 A C G T G A C T A G T C A G C T A G T C C G A T A T C G A G T C A C G T A C T G T G A C A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCTCTGCTGC-----
CTCAGCAGCTGCTACTG
 A C G T A C G T G A C T A G T C A G C T A G T C C G A T A T C G A G T C A C G T A C T G T G A C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTGCTGC----
TNTCCTGCTGTGNNG
 A C G T G A C T A G T C A G C T A G T C C G A T A T C G A G T C A C G T A C T G T G A C A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCTCTGCTGC-
NNGCAGCTGTC
 G A C T A G T C A G C T A G T C C G A T A T C G A G T C A C G T A C T G T G A C A C G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTCTGCTGC
NAHCAGCTGD
 G A C T A G T C A G C T A G T C C G A T A T C G A G T C A C G T A C T G T G A C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCTCTGCTGC
CAGCAGCTGN
 G A C T A G T C A G C T A G T C C G A T A T C G A G T C A C G T A C T G T G A C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T