Information for 3-AGAGGGCGCTGTTTCM (Motif 5)

C G T A T C A G C T G A A C T G A C T G T A C G G A T C A T C G T G A C C A G T A C T G G C A T G A C T G A C T A T G C G T A C
Reverse Opposite:
C A T G T A C G C T G A C T G A C G T A T G A C G T C A A C T G T A G C C T A G A T G C A G T C A G T C A G C T A G T C G C A T
p-value:1e-12
log p-value:-2.958e+01
Information Content per bp:1.725
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets63.7 +/- 21.6bp
Average Position of motif in Background60.3 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP4/MA0685.1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGGCGCTGTTTCM
NAAGGGGGCGTGGCTTN-
 A C G T A C G T C G T A T C A G C T G A A C T G A C T G T A C G G A T C A T C G T G A C C A G T A C T G G C A T G A C T G A C T A T G C G T A C
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAGGGCGCTGTTTCM
AGGGGGCGGGGCTG--
 C G T A T C A G C T G A A C T G A C T G T A C G G A T C A T C G T G A C C A G T A C T G G C A T G A C T G A C T A T G C G T A C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGGCGCTGTTTCM
NNVDGGGYGGGGCYN--
 A C G T C G T A T C A G C T G A A C T G A C T G T A C G G A T C A T C G T G A C C A G T A C T G G C A T G A C T G A C T A T G C G T A C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGGCGCTGTTTCM
NNAGGGGCGGGGTNNA-
 A C G T C G T A T C A G C T G A A C T G A C T G T A C G G A T C A T C G T G A C C A G T A C T G G C A T G A C T G A C T A T G C G T A C
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AGAGGGCGCTGTTTCM
GCCASCAGGGGGCGCYVNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C A G C T G A A C T G A C T G T A C G G A T C A T C G T G A C C A G T A C T G G C A T G A C T G A C T A T G C G T A C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGGCGCTGTTTCM
NNNAAGGGGGCGGGNNN---
 A C G T A C G T A C G T A C G T C G T A T C A G C T G A A C T G A C T G T A C G G A T C A T C G T G A C C A G T A C T G G C A T G A C T G A C T A T G C G T A C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGAGGGCGCTGTTTCM
AGTGGGCGTGGC----
 C G T A T C A G C T G A A C T G A C T G T A C G G A T C A T C G T G A C C A G T A C T G G C A T G A C T G A C T A T G C G T A C
C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------AGAGGGCGCTGTTTCM
TGGCCACCAGGTGGCACTNT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C A G C T G A A C T G A C T G T A C G G A T C A T C G T G A C C A G T A C T G G C A T G A C T G A C T A T G C G T A C
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGCGCTGTTTCM
AAAAATGGCGCCATTTTT
 A C G T A C G T C G T A T C A G C T G A A C T G A C T G T A C G G A T C A T C G T G A C C A G T A C T G G C A T G A C T G A C T A T G C G T A C
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AGAGGGCGCTGTTTCM
--------CTGTTTAC
 C G T A T C A G C T G A A C T G A C T G T A C G G A T C A T C G T G A C C A G T A C T G G C A T G A C T G A C T A T G C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C