Information for 15-GCTCCCACTT (Motif 27)

A C T G A G T C A C G T A G T C A G T C A G T C C G T A A T G C A C G T A C G T
Reverse Opposite:
C G T A C G T A A T C G A C G T A C T G A C T G A C T G C G T A A C T G A G T C
p-value:1e-5
log p-value:-1.221e+01
Information Content per bp:1.972
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.6 +/- 25.4bp
Average Position of motif in Background42.0 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCTCCCACTT
GCTCCG----
 A C T G A G T C A C G T A G T C A G T C A G T C C G T A A T G C A C G T A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GCTCCCACTT---
---ACCACTTGAA
 A C T G A G T C A C G T A G T C A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCTCCCACTT--
---ACCACTTAA
 A C T G A G T C A C G T A G T C A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCTCCCACTT--
---ACCACTTAA
 A C T G A G T C A C G T A G T C A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCTCCCACTT---
----CCACTTGAA
 A C T G A G T C A C G T A G T C A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCCACTT----
NNAGTCCCACTCNNNN
 A C G T A C G T A C T G A G T C A C G T A G T C A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCTCCCACTT
CNGTCCTCCC----
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A G T C C G T A A T G C A C G T A C G T
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCCACTT-
YCCGCCCACGCN
 A C G T A C T G A G T C A C G T A G T C A G T C A G T C C G T A A T G C A C G T A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTCCCACTT
--TCACACCT
 A C T G A G T C A C G T A G T C A G T C A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTCCCACTT-
-CRCCCACGCA
 A C T G A G T C A C G T A G T C A G T C A G T C C G T A A T G C A C G T A C G T A C G T
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A