Information for 12-TTTTTWAAAA (Motif 24)

G A C T A C G T A G C T A G C T A G C T G C A T C G T A C G T A G T C A G C T A
Reverse Opposite:
C G A T A C G T A C G T G C A T C G T A C T G A C T G A T C G A C G T A C T G A
p-value:1e-6
log p-value:-1.584e+01
Information Content per bp:1.730
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif422.4
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets49.2 +/- 30.0bp
Average Position of motif in Background51.8 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTTTWAAAA
-NATTCAAAT
 G A C T A C G T A G C T A G C T A G C T G C A T C G T A C G T A G T C A G C T A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTTTWAAAA
GCTCGTAAAAA
 A C G T G A C T A C G T A G C T A G C T A G C T G C A T C G T A C G T A G T C A G C T A
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTTTWAAAA
GTCGTAAAAA
 G A C T A C G T A G C T A G C T A G C T G C A T C G T A C G T A G T C A G C T A
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTTTTWAAAA--
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T G A C T A C G T A G C T A G C T A G C T G C A T C G T A C G T A G T C A G C T A A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXC10/MA0905.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTTTTWAAAA
GTCGTAAAAT
 G A C T A C G T A G C T A G C T A G C T G C A T C G T A C G T A G T C A G C T A
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTTTWAAAA--
--TTTGAAACCG
 G A C T A C G T A G C T A G C T A G C T G C A T C G T A C G T A G T C A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTTTTWAAAA--
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T G A C T A C G T A G C T A G C T A G C T G C A T C G T A C G T A G T C A G C T A A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTWAAAA---
NNNTTTNTAATACNG
 A C G T A C G T G A C T A C G T A G C T A G C T A G C T G C A T C G T A C G T A G T C A G C T A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0001.1_Arid3a_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTTTTWAAAA---
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T A C G T G A C T A C G T A G C T A G C T A G C T G C A T C G T A C G T A G T C A G C T A A C G T A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTTTWAAAA
AGTCGTAAAAA
 A C G T G A C T A C G T A G C T A G C T A G C T G C A T C G T A C G T A G T C A G C T A
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A