Information for 9-CTCTCGCRAG (Motif 22)

A T G C G A C T A T G C C G A T A T G C A T C G A T G C T C G A G T C A A C T G
Reverse Opposite:
G T A C A C G T A G C T A T C G A T G C A T C G G C T A A T C G C G T A A T C G
p-value:1e-8
log p-value:-1.853e+01
Information Content per bp:1.760
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif592.5
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets38.1 +/- 20.6bp
Average Position of motif in Background50.6 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:CTCTCGCRAG---
-TCTCGCGAGAAT
A T G C G A C T A T G C C G A T A T G C A T C G A T G C T C G A G T C A A C T G A C G T A C G T A C G T
A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

ZBTB33/MA0527.1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CTCTCGCRAG-----
CTCTCGCGAGATCTG
A T G C G A C T A T G C C G A T A T G C A T C G A T G C T C G A G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CTCTCGCRAG---
GGNTCTCGCGAGAAC
A C G T A C G T A T G C G A C T A T G C C G A T A T G C A T C G A T G C T C G A G T C A A C T G A C G T A C G T A C G T
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTCTCGCRAG
TBGCACGCAA-
A C G T A T G C G A C T A T G C C G A T A T G C A T C G A T G C T C G A G T C A A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTCTCGCRAG
--CACGCA--
A T G C G A C T A T G C C G A T A T G C A T C G A T G C T C G A G T C A A C T G
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCGCRAG
NNTTCCCGCCC-
A C G T A C G T A T G C G A C T A T G C C G A T A T G C A T C G A T G C T C G A G T C A A C T G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCTCGCRAG
VDTTTCCCGCCA-
A C G T A C G T A C G T A T G C G A C T A T G C C G A T A T G C A T C G A T G C T C G A G T C A A C T G
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCGCRAG
NYTTCCCGCC--
A C G T A C G T A T G C G A C T A T G C C G A T A T G C A T C G A T G C T C G A G T C A A C T G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCTCGCRAG
TTCCCGCCWG
A T G C G A C T A T G C C G A T A T G C A T C G A T G C T C G A G T C A A C T G
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTCTCGCRAG-
ACCACTCTCGGTCAC
A C G T A C G T A C G T A C G T A T G C G A C T A T G C C G A T A T G C A T C G A T G C T C G A G T C A A C T G A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C