Information for 24-ATACTTAGCAACT (Motif 32)

C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C T G A C G T C G T A A C G T
p-value:1e-7
log p-value:-1.713e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets21.0 +/- 11.4bp
Average Position of motif in Background49.8 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0054.1_Rfx3_1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----ATACTTAGCAACT------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATACTTAGCAACT--
CCGCATAGCAACGGA
 C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ATACTTAGCAACT-
--SCCTAGCAACAG
 C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATACTTAGCAACT--
TACCATAGCAACGGT
 C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATACTTAGCAACT
TGTTKCCTAGCAACM
 A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PH0023.1_Dlx4/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ATACTTAGCAACT
GCGCTATAATTACCGAC-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C A C G T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATACTTAGCAACT
---ATTAACACCT
 C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C A C G T
A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

PH0022.1_Dlx3/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ATACTTAGCAACT
TCGCGATAATTACCGAC-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATACTTAGCAACT
-TAATTAGN----
 C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C A C G T
A C G T A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ATACTTAGCAACT-
----TTMACACCTT
 C G T A A C G T C G T A A G T C A C G T A C G T C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T