Information for 25-TTAATCTTAGACTAAW (Motif 31)

A C G T A C G T G T C A C T G A G A C T A G T C G C A T G C A T T C G A C T A G G T C A A G T C A G C T G T C A C T G A G C T A
Reverse Opposite:
C G A T A G C T A C G T C T G A T C A G C A G T A G T C A C G T C G T A C G T A T C A G C T G A G A C T A C G T C G T A T C G A
p-value:1e-8
log p-value:-1.910e+01
Information Content per bp:1.678
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif77.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets61.1 +/- 24.7bp
Average Position of motif in Background54.7 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTAATCTTAGACTAAW
TTAATGTTTAACC---
 A C G T A C G T G T C A C T G A G A C T A G T C G C A T G C A T T C G A C T A G G T C A A G T C A G C T G T C A C T G A G C T A
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T A C G T

PH0092.1_Lhx2/Jaspar

Match Rank:2
Score:0.53
Offset:7
Orientation:forward strand
Alignment:TTAATCTTAGACTAAW--------
-------TAAACTAATTAGTGAAC
 A C G T A C G T G T C A C T G A G A C T A G T C G C A T G C A T T C G A C T A G G T C A A G T C A G C T G T C A C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.52
Offset:10
Orientation:forward strand
Alignment:TTAATCTTAGACTAAW----
----------GCTAATTGCT
 A C G T A C G T G T C A C T G A G A C T A G T C G C A T G C A T T C G A C T A G G T C A A G T C A G C T G T C A C T G A G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.51
Offset:11
Orientation:reverse strand
Alignment:TTAATCTTAGACTAAW---
-----------NTAATTGN
 A C G T A C G T G T C A C T G A G A C T A G T C G C A T G C A T T C G A C T A G G T C A A G T C A G C T G T C A C T G A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TTAATCTTAGACTAAW
TTAATCCT--------
 A C G T A C G T G T C A C T G A G A C T A G T C G C A T G C A T T C G A C T A G G T C A A G T C A G C T G T C A C T G A G C T A
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TTAATCTTAGACTAAW----
-----NWTAAYCYAATCAWN
 A C G T A C G T G T C A C T G A G A C T A G T C G C A T G C A T T C G A C T A G G T C A A G T C A G C T G T C A C T G A G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T

BSX/MA0876.1/Jaspar

Match Rank:7
Score:0.51
Offset:11
Orientation:reverse strand
Alignment:TTAATCTTAGACTAAW---
-----------NTAATTGG
 A C G T A C G T G T C A C T G A G A C T A G T C G C A T G C A T T C G A C T A G G T C A A G T C A G C T G T C A C T G A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTAATCTTAGACTAAW
YTAATCCY--------
 A C G T A C G T G T C A C T G A G A C T A G T C G C A T G C A T T C G A C T A G G T C A A G T C A G C T G T C A C T G A G C T A
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:9
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:TTAATCTTAGACTAAW----
----------NNTAATTANN
 A C G T A C G T G T C A C T G A G A C T A G T C G C A T G C A T T C G A C T A G G T C A A G T C A G C T G T C A C T G A G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

PDX1/MA0132.2/Jaspar

Match Rank:10
Score:0.50
Offset:11
Orientation:reverse strand
Alignment:TTAATCTTAGACTAAW---
-----------CTAATTAN
 A C G T A C G T G T C A C T G A G A C T A G T C G C A T G C A T T C G A C T A G G T C A A G T C A G C T G T C A C T G A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C