Information for 2-CATTTRTAGGGTT (Motif 3)

A G T C C G T A G A C T A C G T A G C T C T A G C G A T C G T A T C A G A C T G A C T G A G C T A G C T
Reverse Opposite:
C T G A C T G A A G T C A G T C A G T C A C G T C G T A A G T C C T G A G T C A C T G A A C G T A C T G
p-value:1e-223
log p-value:-5.141e+02
Information Content per bp:1.809
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif14.89%
Number of Background Sequences with motif26.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.5 +/- 28.5bp
Average Position of motif in Background39.5 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX21/MA0866.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATTTRTAGGGTT
AACAATGGTAGTGTT
 A C G T A C G T A G T C C G T A G A C T A C G T A G C T C T A G C G A T C G T A T C A G A C T G A C T G A G C T A G C T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

SOX4/MA0867.1/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CATTTRTAGGGTT
GAACAATTGCAGTGTT
 A C G T A C G T A C G T A G T C C G T A G A C T A C G T A G C T C T A G C G A T C G T A T C A G A C T G A C T G A G C T A G C T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CATTTRTAGGGTT
-TTTTATKRGG--
 A G T C C G T A G A C T A C G T A G C T C T A G C G A T C G T A T C A G A C T G A C T G A G C T A G C T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CATTTRTAGGGTT
AACAATTTCAGTGTT
 A C G T A C G T A G T C C G T A G A C T A C G T A G C T C T A G C G A T C G T A T C A G A C T G A C T G A G C T A G C T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CATTTRTAGGGTT
GACCACATTCATACAAT-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G A C T A C G T A G C T C T A G C G A T C G T A T C A G A C T G A C T G A G C T A G C T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CATTTRTAGGGTT
AACAATGNTATTGTT
 A C G T A C G T A G T C C G T A G A C T A C G T A G C T C T A G C G A T C G T A T C A G A C T G A C T G A G C T A G C T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CATTTRTAGGGTT
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G A C T A C G T A G C T C T A G C G A T C G T A T C A G A C T G A C T G A G C T A G C T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------CATTTRTAGGGTT
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G A C T A C G T A G C T C T A G C G A T C G T A T C A G A C T G A C T G A G C T A G C T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CATTTRTAGGGTT
---NNATAAGGNN
 A G T C C G T A G A C T A C G T A G C T C T A G C G A T C G T A T C A G A C T G A C T G A G C T A G C T
A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CATTTRTAGGGTT
ACCACTTGAA-----
 A C G T A C G T A G T C C G T A G A C T A C G T A G C T C T A G C G A T C G T A T C A G A C T G A C T G A G C T A G C T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T