Information for 20-CCTDGATGTTAAHAGG (Motif 23)

A T G C G T A C A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A G A C T C T G A A T C G C T A G
Reverse Opposite:
A G T C A T G C A G C T C G T A A C G T A C G T G T C A C G T A A G T C C G T A A C G T A G T C G A C T G T C A A C T G A T C G
p-value:1e-11
log p-value:-2.568e+01
Information Content per bp:1.799
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.6 +/- 12.3bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCTDGATGTTAAHAGG
---AGGTGTTAAT---
 A T G C G T A C A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A G A C T C T G A A T C G C T A G
A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTDGATGTTAAHAGG
--TAGGTGTGAAG---
 A T G C G T A C A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A G A C T C T G A A T C G C T A G
A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCTDGATGTTAAHAGG
----TATGCWAATBAV
 A T G C G T A C A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A G A C T C T G A A T C G C T A G
A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCTDGATGTTAAHAGG
--AAGGTGTGAAA---
 A T G C G T A C A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A G A C T C T G A A T C G C T A G
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCTDGATGTTAAHAGG
--AAGGTGTKAA----
 A T G C G T A C A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A G A C T C T G A A T C G C T A G
A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCTDGATGTTAAHAGG
---AGGTGTGAAA---
 A T G C G T A C A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A G A C T C T G A A T C G C T A G
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCTDGATGTTAAHAGG-
-----ATGTAAACADGS
 A T G C G T A C A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A G A C T C T G A A T C G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTDGATGTTAAHAGG
TCCAGATGTT------
 A T G C G T A C A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A G A C T C T G A A T C G C T A G
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTDGATGTTAAHAGG
GAAAAGGTGTGAAAATT
 A C G T A T G C G T A C A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A G A C T C T G A A T C G C T A G
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCTDGATGTTAAHAGG---
--TGATTGTTAACAGTTGG
 A T G C G T A C A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A G A C T C T G A A T C G C T A G A C G T A C G T A C G T
A C G T A C G T G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G