Information for 12-CTGATGCTTGATGAGG (Motif 10)

A G T C A C G T C T A G T C G A A C G T A C T G A G T C A G C T A C G T C A T G T C G A A C G T C T A G C G T A A C T G T A C G
Reverse Opposite:
A G T C A G T C A C G T A G T C C G T A A C G T G A T C G T C A T C G A C T A G A G T C C G T A A C G T A G T C C G T A C T A G
p-value:1e-40
log p-value:-9.334e+01
Information Content per bp:1.758
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.83%
Number of Background Sequences with motif27.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets41.0 +/- 29.2bp
Average Position of motif in Background47.6 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTGATGCTTGATGAGG
----TGATTGATGA--
 A G T C A C G T C T A G T C G A A C G T A C T G A G T C A G C T A C G T C A T G T C G A A C G T C T A G C G T A A C T G T A C G
A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGATGCTTGATGAGG
---ATGATKGATGRC-
 A G T C A C G T C T A G T C G A A C G T A C T G A G T C A G C T A C G T C A T G T C G A A C G T C T A G C G T A A C T G T A C G
A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGATGCTTGATGAGG----
---GACGATAATGAGCTTGC
 A G T C A C G T C T A G T C G A A C G T A C T G A G T C A G C T A C G T C A T G T C G A A C G T C T A G C G T A A C T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTGATGCTTGATGAGG-
-------NTAATGAGCT
 A G T C A C G T C T A G T C G A A C G T A C T G A G T C A G C T A C G T C A T G T C G A A C G T C T A G C G T A A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGATGCTTGATGAGG----
---AAACATAATGAGGTTGC
 A G T C A C G T C T A G T C G A A C G T A C T G A G T C A G C T A C G T C A T G T C G A A C G T C T A G C G T A A C T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTGATGCTTGATGAGG
--TTTGATTGATGN--
 A G T C A C G T C T A G T C G A A C G T A C T G A G T C A G C T A C G T C A T G T C G A A C G T C T A G C G T A A C T G T A C G
A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTGATGCTTGATGAGG
----TGATTTATGGC-
 A G T C A C G T C T A G T C G A A C G T A C T G A G T C A G C T A C G T C A T G T C G A A C G T C T A G C G T A A C T G T A C G
A C G T A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CTGATGCTTGATGAGG
----TGATTRATGGCY
 A G T C A C G T C T A G T C G A A C G T A C T G A G T C A G C T A C G T C A T G T C G A A C G T C T A G C G T A A C T G T A C G
A C G T A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTGATGCTTGATGAGG---
--NSTGTTTRCWCAGBNNN
 A G T C A C G T C T A G T C G A A C G T A C T G A G T C A G C T A C G T C A T G T C G A A C G T C T A G C G T A A C T G T A C G A C G T A C G T A C G T
A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

ZNF143/MA0088.2/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGATGCTTGATGAGG-
-CAATGCATTGTGGGTA
 A G T C A C G T C T A G T C G A A C G T A C T G A G T C A G C T A C G T C A T G T C G A A C G T C T A G C G T A A C T G T A C G A C G T
A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A