Information for 1-CAYACTGGDGAGAAAC (Motif 1)

G T A C G T C A A G C T C T G A A T G C G C A T C T A G A C T G C G T A T C A G C G T A T C A G C G T A C G T A C T G A A T G C
Reverse Opposite:
T A C G A G C T A C G T A C G T A G T C C G A T A G T C G C A T A G T C A G T C C G T A A T C G G A C T C T G A A C G T A C T G
p-value:1e-297
log p-value:-6.848e+02
Information Content per bp:1.753
Number of Target Sequences with motif159.0
Percentage of Target Sequences with motif21.72%
Number of Background Sequences with motif59.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.6 +/- 27.1bp
Average Position of motif in Background54.6 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX19/MA0804.1/Jaspar

Match Rank:1
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAYACTGGDGAGAAAC
TTTCACACCTAGGTGTGAAA-
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A A G C T C T G A A T G C G C A T C T A G A C T G C G T A T C A G C G T A T C A G C G T A C G T A C T G A A T G C
C G A T C A G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A G C T A G C T A A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAYACTGGDGAGAAAC
----CWGGCGGGAA--
 G T A C G T C A A G C T C T G A A T G C G C A T C T A G A C T G C G T A T C A G C G T A T C A G C G T A C G T A C T G A A T G C
A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:3
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CAYACTGGDGAGAAAC
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A A G C T C T G A A T G C G C A T C T A G A C T G C G T A T C A G C G T A T C A G C G T A C G T A C T G A A T G C
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CAYACTGGDGAGAAAC-
-----TGGCGGGAAAHB
 G T A C G T C A A G C T C T G A A T G C G C A T C T A G A C T G C G T A T C A G C G T A T C A G C G T A C G T A C T G A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CAYACTGGDGAGAAAC
-----AGGTGTGAAA-
 G T A C G T C A A G C T C T G A A T G C G C A T C T A G A C T G C G T A T C A G C G T A T C A G C G T A C G T A C T G A A T G C
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

GFX(?)/Promoter/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAYACTGGDGAGAAAC
-ATTCTCGCGAGA---
 G T A C G T C A A G C T C T G A A T G C G C A T C T A G A C T G C G T A T C A G C G T A T C A G C G T A C G T A C T G A A T G C
A C G T T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CAYACTGGDGAGAAAC
------GGCGGGAARN
 G T A C G T C A A G C T C T G A A T G C G C A T C T A G A C T G C G T A T C A G C G T A T C A G C G T A C G T A C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CAYACTGGDGAGAAAC
-----TGGGGA-----
 G T A C G T C A A G C T C T G A A T G C G C A T C T A G A C T G C G T A T C A G C G T A T C A G C G T A C G T A C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CAYACTGGDGAGAAAC
-----AGGTGTTAAT-
 G T A C G T C A A G C T C T G A A T G C G C A T C T A G A C T G C G T A T C A G C G T A T C A G C G T A C G T A C T G A A T G C
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CAYACTGGDGAGAAAC--
-GAAAAGGTGTGAAAATT
 G T A C G T C A A G C T C T G A A T G C G C A T C T A G A C T G C G T A T C A G C G T A T C A G C G T A C G T A C T G A A T G C A C G T A C G T
A C G T A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T