Information for 11-AGATCAATGG (Motif 9)

C T G A C T A G C T G A G A C T G T A C C T G A C T G A C G A T C A T G A T C G
Reverse Opposite:
T A G C G T A C G C T A A G C T A G C T C A T G C T G A G A C T A G T C G A C T
p-value:1e-14
log p-value:-3.454e+01
Information Content per bp:1.679
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.93%
Number of Background Sequences with motif927.9
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets51.4 +/- 24.6bp
Average Position of motif in Background50.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--AGATCAATGG
HNRAATCAAT--
 A C G T A C G T C T G A C T A G C T G A G A C T G T A C C T G A C T G A C G A T C A T G A T C G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---AGATCAATGG----
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T C T G A C T A G C T G A G A C T G T A C C T G A C T G A C G A T C A T G A T C G A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:AGATCAATGG
-GAACAATGG
 C T G A C T A G C T G A G A C T G T A C C T G A C T G A C G A T C A T G A T C G
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---AGATCAATGG----
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T C T G A C T A G C T G A G A C T G T A C C T G A C T G A C G A T C A T G A T C G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AGATCAATGG
AAAGATCAAAGG
 A C G T A C G T C T G A C T A G C T G A G A C T G T A C C T G A C T G A C G A T C A T G A T C G
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

LEF1/MA0768.1/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AGATCAATGG---
AAAGATCAAAGGGTT
 A C G T A C G T C T G A C T A G C T G A G A C T G T A C C T G A C T G A C G A T C A T G A T C G A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AGATCAATGG--
ACATCAAAGGNA
 C T G A C T A G C T G A G A C T G T A C C T G A C T G A C G A T C A T G A T C G A C G T A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:AGATCAATGG
VRAACAATGG
 C T G A C T A G C T G A G A C T G T A C C T G A C T G A C G A T C A T G A T C G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:9
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AGATCAATGG
DGATCRATAN
 C T G A C T A G C T G A G A C T G T A C C T G A C T G A C G A T C A T G A T C G
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---AGATCAATGG----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T C T G A C T A G C T G A G A C T G T A C C T G A C T G A C G A T C A T G A T C G A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A