Information for 18-AGGTCGGAGC (Motif 29)

G T C A C T A G A T C G C G A T G A T C C T A G A C T G T C G A A C T G A G T C
Reverse Opposite:
A C T G T G A C A G C T G T A C G A T C C T A G G C T A A T G C G A T C C A G T
p-value:1e-6
log p-value:-1.606e+01
Information Content per bp:1.790
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif221.4
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets36.8 +/- 25.4bp
Average Position of motif in Background50.3 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:AGGTCGGAGC
----CGGAGC
 G T C A C T A G A T C G C G A T G A T C C T A G A C T G T C G A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGGTCGGAGC
RGKGGGCGGAGC
 A C G T A C G T G T C A C T A G A T C G C G A T G A T C C T A G A C T G T C G A A C T G A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCGGAGC-
GGGGGCGGGGCC
 A C G T G T C A C T A G A T C G C G A T G A T C C T A G A C T G T C G A A C T G A G T C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCGGAGC--
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T G T C A C T A G A T C G C G A T G A T C C T A G A C T G T C G A A C T G A G T C A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGTCGGAGC--
AGGGGGCGGGGCTG
 A C G T A C G T G T C A C T A G A T C G C G A T G A T C C T A G A C T G T C G A A C T G A G T C A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGTCGGAGC
GGGGNGGGGC
 G T C A C T A G A T C G C G A T G A T C C T A G A C T G T C G A A C T G A G T C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGTCGGAGC
TGGGTGGGGC
 G T C A C T A G A T C G C G A T G A T C C T A G A C T G T C G A A C T G A G T C
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCGGAGC
GGGGGCGGGGC
 A C G T G T C A C T A G A T C G C G A T G A T C C T A G A C T G T C G A A C T G A G T C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCGGAGC---
CAGGCCNNGGCCNN
 A C G T G T C A C T A G A T C G C G A T G A T C C T A G A C T G T C G A A C T G A G T C A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGTCGGAGC
DGGGYGKGGC
 G T C A C T A G A T C G C G A T G A T C C T A G A C T G T C G A A C T G A G T C
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C