Information for 16-CAAAKGACGC (Motif 27)

G A T C C G T A C G T A C T G A A C T G A C T G C T G A G T A C T A C G A T G C
Reverse Opposite:
T A C G A T G C C A T G G A C T T G A C T G A C G A C T A C G T A C G T C T A G
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.678
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif615.9
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets54.9 +/- 29.2bp
Average Position of motif in Background50.1 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAAAKGACGC
RACAAWGG----
 A C G T A C G T G A T C C G T A C G T A C T G A A C T G A C T G C T G A G T A C T A C G A T G C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAAAKGACGC
AACAAAGG----
 A C G T A C G T G A T C C G T A C G T A C T G A A C T G A C T G C T G A G T A C T A C G A T G C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CAAAKGACGC
AAAACAAAGG----
 A C G T A C G T A C G T A C G T G A T C C G T A C G T A C T G A A C T G A C T G C T G A G T A C T A C G A T G C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAAAKGACGC-
ACAAAGGNBCCT
 A C G T G A T C C G T A C G T A C T G A A C T G A C T G C T G A G T A C T A C G A T G C A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CAAAKGACGC
VRRACAAWGG----
 A C G T A C G T A C G T A C G T G A T C C G T A C G T A C T G A A C T G A C T G C T G A G T A C T A C G A T G C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAAAKGACGC-
CGACCAACTGCCGTG
 A C G T A C G T A C G T A C G T G A T C C G T A C G T A C T G A A C T G A C T G C T G A G T A C T A C G A T G C A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAAAKGACGC
ACWTCAAAGG----
 A C G T A C G T A C G T A C G T G A T C C G T A C G T A C T G A A C T G A C T G C T G A G T A C T A C G A T G C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAAAKGACGC
ACATCAAAGG----
 A C G T A C G T A C G T A C G T G A T C C G T A C G T A C T G A A C T G A C T G C T G A G T A C T A C G A T G C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAAAKGACGC
RNAACAATGG----
 A C G T A C G T A C G T A C G T G A T C C G T A C G T A C T G A A C T G A C T G C T G A G T A C T A C G A T G C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CAAAKGACGC
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A C T G A A C T G A C T G C T G A G T A C T A C G A T G C
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A