Information for 8-GGAATGTCCACAAAGG (Motif 25)

A C T G C T A G C G T A G T C A C G A T A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T G A C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C A C G T A G C T A C G T C T A G A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C G T A G T C A G T C
p-value:1e-8
log p-value:-1.903e+01
Information Content per bp:1.921
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.2 +/- 15.4bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxk1/MA0852.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAATGTCCACAAAGG-
AAAATGTAAACAAACAG
 A C T G C T A G C G T A G T C A C G A T A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T G A C G T A A C T G C T A G A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAATGTCCACAAAGG-
AAAATGTAAACAAACAG
 A C T G C T A G C G T A G T C A C G A T A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T G A C G T A A C T G C T A G A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:GGAATGTCCACAAAGG
--------AACAAAGG
 A C T G C T A G C G T A G T C A C G A T A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T G A C G T A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

PB0019.1_Foxl1_1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGAATGTCCACAAAGG-
TAAATGTAAACAAAGGT
 A C T G C T A G C G T A G T C A C G A T A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T G A C G T A A C T G C T A G A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:GGAATGTCCACAAAGG
--------RACAAWGG
 A C T G C T A G C G T A G T C A C G A T A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T G A C G T A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

TEAD3/MA0808.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAATGTCCACAAAGG
TGGAATGT---------
 A C G T A C T G C T A G C G T A G T C A C G A T A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T G A C G T A A C T G C T A G
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:GGAATGTCCACAAAGG
---------ACAAAG-
 A C T G C T A G C G T A G T C A C G A T A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T G A C G T A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGAATGTCCACAAAGG-
AAAAAGTAAACAAAGAC
 A C T G C T A G C G T A G T C A C G A T A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T G A C G T A A C T G C T A G A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGAATGTCCACAAAGG
NTGGAATGTN--------
 A C G T A C G T A C T G C T A G C G T A G T C A C G A T A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T G A C G T A A C T G C T A G
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGAATGTCCACAAAGG-
AAAAAGTAAACAAACAC
 A C T G C T A G C G T A G T C A C G A T A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T G A C G T A A C T G C T A G A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C