Information for 13-GCGGAGATCT (Motif 19)

A C T G A G T C T A C G A T C G C T G A A C T G T G C A C G A T A G T C A G C T
Reverse Opposite:
C T G A A C T G G C T A A C G T A G T C A G C T A T G C A T G C C T A G G T A C
p-value:1e-9
log p-value:-2.282e+01
Information Content per bp:1.839
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif111.2
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets55.6 +/- 28.0bp
Average Position of motif in Background49.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCGGAGATCT-----
NNNCTGATATCTCNNNN
 A C G T A C G T A C T G A G T C T A C G A T C G C T G A A C T G T G C A C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCGGAGATCT
GCAGTGATTT
 A C T G A G T C T A C G A T C G C T G A A C T G T G C A C G A T A G T C A G C T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCGGAGATCT
TGCTGTGATTT
 A C G T A C T G A G T C T A C G A T C G C T G A A C T G T G C A C G A T A G T C A G C T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGGAGATCT
-CGGAGC---
 A C T G A G T C T A C G A T C G C T G A A C T G T G C A C G A T A G T C A G C T
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGATCT
RGKGGGCGGAGC---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A C G A T C G C T G A A C T G T G C A C G A T A G T C A G C T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

POL005.1_DPE/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCGGAGATCT--
---NACATCTTN
 A C T G A G T C T A C G A T C G C T G A A C T G T G C A C G A T A G T C A G C T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A A T G C C T G A C G A T T A G C G A C T C A G T A G T C

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCGGAGATCT
DCCGGAARYN-
 A C G T A C T G A G T C T A C G A T C G C T G A A C T G T G C A C G A T A G T C A G C T
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCGGAGATCT--
GCCGCCATCTTG
 A C T G A G T C T A C G A T C G C T G A A C T G T G C A C G A T A G T C A G C T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

ETV5/MA0765.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCGGAGATCT
ACCGGAAGTG-
 A C G T A C T G A G T C T A C G A T C G C T G A A C T G T G C A C G A T A G T C A G C T
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCGGAGATCT-----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C T G A G T C T A C G A T C G C T G A A C T G T G C A C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G