Information for 13-CCAGCCATTCCTC (Motif 15)

A T G C A G T C C G T A A C T G A G T C A T G C C G T A A C G T A C G T A G T C A G T C A G C T A G T C
Reverse Opposite:
A C T G C T G A C T A G A C T G C G T A T G C A A C G T A T C G C T A G A G T C A C G T A C T G A T C G
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.861
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 25.0bp
Average Position of motif in Background54.7 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0139.1_Pitx3/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCCATTCCTC--
GNNAGCTAATCCCCCN
 A C G T A T G C A G T C C G T A A C T G A G T C A T G C C G T A A C G T A C G T A G T C A G T C A G C T A G T C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CCAGCCATTCCTC-
-------TTCCTCT
 A T G C A G T C C G T A A C T G A G T C A T G C C G T A A C G T A C G T A G T C A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:CCAGCCATTCCTC-
--------TCCCCA
 A T G C A G T C C G T A A C T G A G T C A T G C C G T A A C G T A C G T A G T C A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCAGCCATTCCTC--
SCAGYCADGCATGAC
 A T G C A G T C C G T A A C T G A G T C A T G C C G T A A C G T A C G T A G T C A G T C A G C T A G T C A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCAGCCATTCCTC-
----RCATTCCWGG
 A T G C A G T C C G T A A C T G A G T C A T G C C G T A A C G T A C G T A G T C A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

TEAD3/MA0808.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCAGCCATTCCTC
----ACATTCCA-
 A T G C A G T C C G T A A C T G A G T C A T G C C G T A A C G T A C G T A G T C A G T C A G C T A G T C
A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCAGCCATTCCTC
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A A C T G A G T C A T G C C G T A A C G T A C G T A G T C A G T C A G C T A G T C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCCATTCCTC
TCCCAGMCRAGCCCC
 A C G T A C G T A T G C A G T C C G T A A C T G A G T C A T G C C G T A A C G T A C G T A G T C A G T C A G C T A G T C
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCAGCCATTCCTC
BCAGACWA-----
 A T G C A G T C C G T A A C T G A G T C A T G C C G T A A C G T A C G T A G T C A G T C A G C T A G T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCAGCCATTCCTC--
-----CNGTCCTCCC
 A T G C A G T C C G T A A C T G A G T C A T G C C G T A A C G T A C G T A G T C A G T C A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C