Information for 8-CACTTTGAACCCA (Motif 7)

G T A C G C T A A G T C A C G T A C G T C G A T A C T G C G T A C T G A A G T C G T A C A G T C G T C A
Reverse Opposite:
A C G T C T A G C A T G C T A G A G C T C G A T G T A C C G T A G T C A C G T A A C T G C G A T A C T G
p-value:1e-13
log p-value:-3.058e+01
Information Content per bp:1.802
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 29.3bp
Average Position of motif in Background40.2 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CACTTTGAACCCA
ATTGGACTTTGACCCC-
 A C G T A C G T A C G T A C G T G T A C G C T A A G T C A C G T A C G T C G A T A C T G C G T A C T G A A G T C G T A C A G T C G T C A
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CACTTTGAACCCA
TGGACTTTGNNCTCN
 A C G T A C G T G T A C G C T A A G T C A C G T A C G T C G A T A C T G C G T A C T G A A G T C G T A C A G T C G T C A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACTTTGAACCCA-
TGGACTTTGNNCTNTG
 A C G T A C G T G T A C G C T A A G T C A C G T A C G T C G A T A C T G C G T A C T G A A G T C G T A C A G T C G T C A A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACTTTGAACCCA
TNCCTTTGATCTTN
 A C G T G T A C G C T A A G T C A C G T A C G T C G A T A C T G C G T A C T G A A G T C G T A C A G T C G T C A
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACTTTGAACCCA
TGACCTTTGACCCC-
 A C G T A C G T G T A C G C T A A G T C A C G T A C G T C G A T A C T G C G T A C T G A A G T C G T A C A G T C G T C A
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACTTTGAACCCA-
AATCCCTTTGATCTATC
 A C G T A C G T A C G T G T A C G C T A A G T C A C G T A C G T C G A T A C T G C G T A C T G A A G T C G T A C A G T C G T C A A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CACTTTGAACCCA
-CCTTTGATGT--
 G T A C G C T A A G T C A C G T A C G T C G A T A C T G C G T A C T G A A G T C G T A C A G T C G T C A
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACTTTGAACCCA
TGACCTTTGACCCC-
 A C G T A C G T G T A C G C T A A G T C A C G T A C G T C G A T A C T G C G T A C T G A A G T C G T A C A G T C G T C A
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACTTTGAACCCA
TNCCTTTGATGT--
 A C G T G T A C G C T A A G T C A C G T A C G T C G A T A C T G C G T A C T G A A G T C G T A C A G T C G T C A
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACTTTGAACCCA
TGACCTTTGACCCC-
 A C G T A C G T G T A C G C T A A G T C A C G T A C G T C G A T A C T G C G T A C T G A A G T C G T A C A G T C G T C A
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T