Information for 4-AACAGCGCCACCT (Motif 5)

C T G A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A G T C G C T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C A G T A C T G C T A G A G T C A C T G A G T C A C G T A C T G A C G T A G C T
p-value:1e-15
log p-value:-3.653e+01
Information Content per bp:1.914
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 21.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AACAGCGCCACCT
AGCAACAGCCGCACC-
 A C G T A C G T A C G T C T G A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A G T C G C T A A G T C A G T C A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AACAGCGCCACCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T C T G A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A G T C G C T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AACAGCGCCACCT----
-NNGGCGACACCTCNNN
 C T G A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A G T C G C T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGCCACCT
TCNNTTTACAGCGNNNT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A G T C G C T A A G T C A G T C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGCCACCT
TCNNTTTACAGCGNNNT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A G T C G C T A A G T C A G T C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AACAGCGCCACCT--------
-ANAGTGCCACCTGGTGGCCA
 C T G A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A G T C G C T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AACAGCGCCACCT--------
--TAGCGCCCCCTGGTGGCCA
 C T G A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A G T C G C T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGCCACCT
TCNCTTTACAGCGNNNT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A G T C G C T A A G T C A G T C A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACAGCGCCACCT----
GGTCCCGCCCCCTTCTC
 C T G A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A G T C G C T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACAGCGCCACCT-
TGCCTGCGYCMCCTT
 A C G T C T G A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A G T C G C T A A G T C A G T C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T