Information for 4-TGKACTTTGDACTTTG (Motif 4)

C G A T C A T G A C G T C G T A T A G C G A C T A G C T C A G T A T C G C T G A T G C A G A T C G A C T A C G T A C G T A C T G
Reverse Opposite:
G T A C T G C A T G C A C T G A C T A G A C G T G A C T T A G C G T C A C T G A C T G A A T C G G C A T T G C A G T A C G C T A
p-value:1e-17
log p-value:-3.994e+01
Information Content per bp:1.596
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif181.5
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets49.1 +/- 26.8bp
Average Position of motif in Background49.3 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TGKACTTTGDACTTTG
TGGACTTTGNNCTNTG
 C G A T C A T G A C G T C G T A T A G C G A C T A G C T C A G T A T C G C T G A T G C A G A T C G A C T A C G T A C G T A C T G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGKACTTTGDACTTTG
TGGACTTTGNNCTCN-
 C G A T C A T G A C G T C G T A T A G C G A C T A G C T C A G T A T C G C T G A T G C A G A T C G A C T A C G T A C G T A C T G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.72
Offset:6
Orientation:reverse strand
Alignment:TGKACTTTGDACTTTG
------CTGACCTTTG
 C G A T C A T G A C G T C G T A T A G C G A C T A G C T C A G T A T C G C T G A T G C A G A T C G A C T A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGKACTTTGDACTTTG
ATTGGACTTTGACCCC--
 A C G T A C G T C G A T C A T G A C G T C G T A T A G C G A C T A G C T C A G T A T C G C T G A T G C A G A T C G A C T A C G T A C G T A C T G
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TGKACTTTGDACTTTG---
---NNATTGGACTTTNGNN
 C G A T C A T G A C G T C G T A T A G C G A C T A G C T C A G T A T C G C T G A T G C A G A T C G A C T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGKACTTTGDACTTTG
GTTGACCTTTGACCTTT-
 A C G T A C G T C G A T C A T G A C G T C G T A T A G C G A C T A G C T C A G T A T C G C T G A T G C A G A T C G A C T A C G T A C G T A C T G
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGKACTTTGDACTTTG
---CCTTTGATCTTT-
 C G A T C A T G A C G T C G T A T A G C G A C T A G C T C A G T A T C G C T G A T G C A G A T C G A C T A C G T A C G T A C T G
A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGKACTTTGDACTTTG
AACCCTTTGATCTTT-
 C G A T C A T G A C G T C G T A T A G C G A C T A G C T C A G T A T C G C T G A T G C A G A T C G A C T A C G T A C G T A C T G
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGKACTTTGDACTTTG
-TGACCTTGACCT---
 C G A T C A T G A C G T C G T A T A G C G A C T A G C T C A G T A T C G C T G A T G C A G A T C G A C T A C G T A C G T A C T G
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGKACTTTGDACTTTG---
---NNNNTGACCTTTNNNN
 C G A T C A T G A C G T C G T A T A G C G A C T A G C T C A G T A T C G C T G A T G C A G A T C G A C T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A