Information for 2-GCCGCCATTT (Motif 2)

C A T G A T G C G T A C C A T G G A T C A G T C G T C A A C G T A C G T G C A T
Reverse Opposite:
C G T A T G C A T G C A A C G T C T A G C T A G G T A C C A T G T A C G G T A C
p-value:1e-52
log p-value:-1.209e+02
Information Content per bp:1.682
Number of Target Sequences with motif186.0
Percentage of Target Sequences with motif21.21%
Number of Background Sequences with motif2762.3
Percentage of Background Sequences with motif5.80%
Average Position of motif in Targets50.8 +/- 22.7bp
Average Position of motif in Background51.4 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCATTT
GTCCGCCATTA
 A C G T C A T G A T G C G T A C C A T G G A T C A G T C G T C A A C G T A C G T G C A T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GCCGCCATTT--
GCNGCCATCTTG
 C A T G A T G C G T A C C A T G G A T C A G T C G T C A A C G T A C G T G C A T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GCCGCCATTT--
GCCGCCATCTTG
 C A T G A T G C G T A C C A T G G A T C A G T C G T C A A C G T A C G T G C A T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCATTT-
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A C G T A C G T C A T G A T G C G T A C C A T G G A T C A G T C G T C A A C G T A C G T G C A T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GCCGCCATTT--
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T G C G T A C C A T G G A T C A G T C G T C A A C G T A C G T G C A T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCATTT--
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T C A T G A T G C G T A C C A T G G A T C A G T C G T C A A C G T A C G T G C A T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCCGCCATTT--
--GGCCATTAAC
 C A T G A T G C G T A C C A T G G A T C A G T C G T C A A C G T A C G T G C A T A C G T A C G T
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCCGCCATTT
--TGCCAA--
 C A T G A T G C G T A C C A T G G A T C A G T C G T C A A C G T A C G T G C A T
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCATTT--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T C A T G A T G C G T A C C A T G G A T C A G T C G T C A A C G T A C G T G C A T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCGCCATTT---
---GCCATCTGTT
 C A T G A T G C G T A C C A T G G A T C A G T C G T C A A C G T A C G T G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T