p-value: | 1e-11 |
log p-value: | -2.678e+01 |
Information Content per bp: | 1.680 |
Number of Target Sequences with motif | 17.0 |
Percentage of Target Sequences with motif | 1.94% |
Number of Background Sequences with motif | 89.6 |
Percentage of Background Sequences with motif | 0.19% |
Average Position of motif in Targets | 47.3 +/- 24.5bp |
Average Position of motif in Background | 48.6 +/- 27.5bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTGYCATGGCMACCA GTTGCCATGGCAACM- |
|
|
|
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 2 |
Score: | 0.78 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTGYCATGGCMACCA GTTGCCATGGCAACCG |
|
|
|
Rfx1/MA0509.1/Jaspar
Match Rank: | 3 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTGYCATGGCMACCA GTTGCCATGGCAAC-- |
|
|
|
RFX2/MA0600.2/Jaspar
Match Rank: | 4 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTGYCATGGCMACCA CGTTGCCATGGCAACG- |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 5 |
Score: | 0.75 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTGYCATGGCMACCA -TTGCCATGGCAACN- |
|
|
|
RFX3/MA0798.1/Jaspar
Match Rank: | 6 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTGYCATGGCMACCA CGTTGCCATGGCAACN- |
|
|
|
RFX5/MA0510.2/Jaspar
Match Rank: | 7 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCTGYCATGGCMACCA CGTTGCCATGGCAACG- |
|
|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 8 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTGYCATGGCMACCA -TTGCCATGGCAACC- |
|
|
|
RFX4/MA0799.1/Jaspar
Match Rank: | 9 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTGYCATGGCMACCA CGTTGCCATGGCAACN- |
|
|
|
PB0055.1_Rfx4_1/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTGYCATGGCMACCA- --TACCATAGCAACGGT |
|
|
|