Information for 10-GABCAGAGGG (Motif 8)

T A C G T C G A A C T G G T A C T C G A T C A G G T C A T A C G T A C G A C T G
Reverse Opposite:
T G A C A T G C A T G C C A G T A G T C A G C T C A T G T G A C A G C T A T G C
p-value:1e-12
log p-value:-2.787e+01
Information Content per bp:1.453
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.60%
Number of Background Sequences with motif323.2
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets59.8 +/- 25.1bp
Average Position of motif in Background49.9 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GABCAGAGGG--
TAGGGCAAAGGTCA
 A C G T A C G T T A C G T C G A A C T G G T A C T C G A T C A G G T C A T A C G T A C G A C T G A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GABCAGAGGG--
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T T A C G T C G A A C T G G T A C T C G A T C A G G T C A T A C G T A C G A C T G A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GABCAGAGGG--
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T T A C G T C G A A C T G G T A C T C G A T C A G G T C A T A C G T A C G A C T G A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GABCAGAGGG--
TGGGGCAAAGGTCA
 A C G T A C G T T A C G T C G A A C T G G T A C T C G A T C A G G T C A T A C G T A C G A C T G A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GABCAGAGGG---
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T T A C G T C G A A C T G G T A C T C G A T C A G G T C A T A C G T A C G A C T G A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GABCAGAGGG--
GAGGTCAAAGGTCA
 A C G T A C G T T A C G T C G A A C T G G T A C T C G A T C A G G T C A T A C G T A C G A C T G A C G T A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GABCAGAGGG--
AAAGATCAAAGGGTT
 A C G T A C G T A C G T T A C G T C G A A C T G G T A C T C G A T C A G G T C A T A C G T A C G A C T G A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GABCAGAGGG-
-AACAGATGGC
 T A C G T C G A A C T G G T A C T C G A T C A G G T C A T A C G T A C G A C T G A C G T
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GABCAGAGGG---
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T T A C G T C G A A C T G G T A C T C G A T C A G G T C A T A C G T A C G A C T G A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GABCAGAGGG--------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T T A C G T C G A A C T G G T A C T C G A T C A G G T C A T A C G T A C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G