Information for 18-CACTCATTAC (Motif 18)

A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.405e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 6.6bp
Average Position of motif in Background42.9 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0039.1_Mnx1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CACTCATTAC---
NNNCACTAATTANTNN
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CACTCATTAC
AGCTCATTAT
 A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CACTCATTAC-
---YCATTAMC
 A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

HOXA2/MA0900.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CACTCATTAC-
-CCTAATTACC
 A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T
A C G T T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C

PH0175.1_Vax2/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CACTCATTAC---
GTGCACTAATTAAGAC
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C

MEOX1/MA0661.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CACTCATTAC-
-GCTAATTAAC
 A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T
A C G T T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C

GSX1/MA0892.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CACTCATTAC-
-CCTAATTAAA
 A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T
A C G T G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A

NOTO/MA0710.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CACTCATTAC-
-GCTAATTAGC
 A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T
A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

PH0031.1_Evx1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CACTCATTAC----
NNNCACTAATTAGTNNT
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T

HOXB3/MA0903.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CACTCATTAC-
-ACTAATTAGC
 A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T
A C G T C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C