Information for 17-GCSCAGTCGC (Motif 17)

A C T G A G T C A T G C G T A C C G T A A C T G C G A T A G T C A C T G T G A C
Reverse Opposite:
A C T G A G T C C T A G C G T A T G A C G C A T C A T G T A C G C T A G T G A C
p-value:1e-6
log p-value:-1.492e+01
Information Content per bp:1.738
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.61%
Number of Background Sequences with motif329.2
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets52.8 +/- 27.6bp
Average Position of motif in Background49.4 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCSCAGTCGC
TGCGCAGGCGC
 A C G T A C T G A G T C A T G C G T A C C G T A A C T G C G A T A G T C A C T G T G A C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCSCAGTCGC-------
--TCCGTCGCTTAAAAG
 A C T G A G T C A T G C G T A C C G T A A C T G C G A T A G T C A C T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCSCAGTCGC--
GCGCATGCGCAG
 A C T G A G T C A T G C G T A C C G T A A C T G C G A T A G T C A C T G T G A C A C G T A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCSCAGTCGC
GTGCGCATGCGC
 A C G T A C G T A C T G A G T C A T G C G T A C C G T A A C T G C G A T A G T C A C T G T G A C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCSCAGTCGC
TGCCCAGNHW-
 A C G T A C T G A G T C A T G C G T A C C G T A A C T G C G A T A G T C A C T G T G A C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCSCAGTCGC
CAGTGTGGTCGC
 A C G T A C G T A C T G A G T C A T G C G T A C C G T A A C T G C G A T A G T C A C T G T G A C
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCSCAGTCGC----
ATGTACAGTAGCAAAG
 A C G T A C G T A C T G A G T C A T G C G T A C C G T A A C T G C G A T A G T C A C T G T G A C A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCSCAGTCGC----
ATTTACAGTAGCAAAA
 A C G T A C G T A C T G A G T C A T G C G T A C C G T A A C T G C G A T A G T C A C T G T G A C A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

ZBED1/MA0749.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCSCAGTCGC-----
--TATGTCGCGATAG
 A C T G A G T C A T G C G T A C C G T A A C T G C G A T A G T C A C T G T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCSCAGTCGC--
--CCAGACRSVB
 A C T G A G T C A T G C G T A C C G T A A C T G C G A T A G T C A C T G T G A C A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C