Information for 3-CTTRACTTTGGGACAG (Motif 8)

A T G C A G C T A C G T C T A G C G T A A G T C C A G T A G C T A C G T A C T G C A T G C A T G C G T A A T G C C G T A A C T G
Reverse Opposite:
T A G C A C G T A T C G A C G T G A T C G A T C A G T C C G T A C T G A G C T A T C A G A C G T A G T C G T C A C T G A A T C G
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.778
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.9 +/- 25.0bp
Average Position of motif in Background49.2 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.56
Offset:8
Orientation:forward strand
Alignment:CTTRACTTTGGGACAG--
--------TGGAACAGMA
 A T G C A G C T A C G T C T A G C G T A A G T C C A G T A G C T A C G T A C T G C A T G C A T G C G T A A T G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTTRACTTTGGGACAG
-TTGACTTTT------
 A T G C A G C T A C G T C T A G C G T A A G T C C A G T A G C T A C G T A C T G C A T G C A T G C G T A A T G C C G T A A C T G
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTTRACTTTGGGACAG
------CCAGGAACAG
 A T G C A G C T A C G T C T A G C G T A A G T C C A G T A G C T A C G T A C T G C A T G C A T G C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTTRACTTTGGGACAG-
------NTTGATACATT
 A T G C A G C T A C G T C T A G C G T A A G T C C A G T A G C T A C G T A C T G C A T G C A T G C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTTRACTTTGGGACAG
--TGACCTTGAV----
 A T G C A G C T A C G T C T A G C G T A A G T C C A G T A G C T A C G T A C T G C A T G C A T G C G T A A T G C C G T A A C T G
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:CTTRACTTTGGGACAG-
-----------CACAGN
 A T G C A G C T A C G T C T A G C G T A A G T C C A G T A G C T A C G T A C T G C A T G C A T G C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CTTRACTTTGGGACAG
NNNNATGACCTTGANTN--
 A C G T A C G T A C G T A T G C A G C T A C G T C T A G C G T A A G T C C A G T A G C T A C G T A C T G C A T G C A T G C G T A A T G C C G T A A C T G
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTTRACTTTGGGACAG
-ATGACCTTGA-----
 A T G C A G C T A C G T C T A G C G T A A G T C C A G T A G C T A C G T A C T G C A T G C A T G C G T A A T G C C G T A A C T G
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CTTRACTTTGGGACAG-
-------TTGCAACATN
 A T G C A G C T A C G T C T A G C G T A A G T C C A G T A G C T A C G T A C T G C A T G C A T G C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTTRACTTTGGGACAG
BNTGDCCTTG------
 A T G C A G C T A C G T C T A G C G T A A G T C C A G T A G C T A C G T A C T G C A T G C A T G C G T A A T G C C G T A A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T