Information for 5-ATCAATATTT (Motif 6)

T G C A G A C T A T G C G C T A T C G A G A C T T G C A G C A T C G A T A G C T
Reverse Opposite:
T C G A G C T A C G T A A C G T C T G A A G C T C G A T T A C G C T G A A C G T
p-value:1e-11
log p-value:-2.540e+01
Information Content per bp:1.653
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif10.01%
Number of Background Sequences with motif2080.8
Percentage of Background Sequences with motif4.30%
Average Position of motif in Targets47.8 +/- 28.0bp
Average Position of motif in Background49.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--ATCAATATTT
DGATCRATAN--
 A C G T A C G T T G C A G A C T A T G C G C T A T C G A G A C T T G C A G C A T C G A T A G C T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:ATCAATATTT
ATGAATATTC
 T G C A G A C T A T G C G C T A T C G A G A C T T G C A G C A T C G A T A G C T
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---ATCAATATTT-
NNTNNCAATATTAG
 A C G T A C G T A C G T T G C A G A C T A T G C G C T A T C G A G A C T T G C A G C A T C G A T A G C T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---ATCAATATTT-
NNTNNCAATATTAG
 A C G T A C G T A C G T T G C A G A C T A T G C G C T A T C G A G A C T T G C A G C A T C G A T A G C T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----ATCAATATTT
HNRAATCAAT----
 A C G T A C G T A C G T A C G T T G C A G A C T A T G C G C T A T C G A G A C T T G C A G C A T C G A T A G C T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--ATCAATATTT
TAATCGATAA--
 A C G T A C G T T G C A G A C T A T G C G C T A T C G A G A C T T G C A G C A T C G A T A G C T
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------ATCAATATTT-
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A G A C T A T G C G C T A T C G A G A C T T G C A G C A T C G A T A G C T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----ATCAATATTT
AAAAAATCGATAAT-
 A C G T A C G T A C G T A C G T A C G T T G C A G A C T A T G C G C T A T C G A G A C T T G C A G C A T C G A T A G C T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:9
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----ATCAATATTT
AAAAAATCAATAAT-
 A C G T A C G T A C G T A C G T A C G T T G C A G A C T A T G C G C T A T C G A G A C T T G C A G C A T C G A T A G C T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ATCAATATTT
TAATCGATAA--
 A C G T A C G T T G C A G A C T A T G C G C T A T C G A G A C T T G C A G C A T C G A T A G C T
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A A C G T A C G T