Information for 4-GGTTGGACTTTGT (Motif 3)

A T C G A C T G A C G T A C G T A C T G T C A G C G T A A G T C A C G T A C G T C G A T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C G T C A C G T A G T A C T A G C
p-value:1e-14
log p-value:-3.265e+01
Information Content per bp:1.861
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 24.4bp
Average Position of motif in Background70.8 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGGACTTTGT--
NNATTGGACTTTNGNN
 A C G T A T C G A C T G A C G T A C G T A C T G T C A G C G T A A G T C A C G T A C G T C G A T A C T G A G C T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GGTTGGACTTTGT-----
---TGGACTTTGNNCTCN
 A T C G A C T G A C G T A C G T A C T G T C A G C G T A A G T C A C G T A C G T C G A T A C T G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGTTGGACTTTGT------
---TGGACTTTGNNCTNTG
 A T C G A C T G A C G T A C G T A C T G T C A G C G T A A G T C A C G T A C G T C G A T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGTTGGACTTTGT----
-ATTGGACTTTGACCCC
 A T C G A C T G A C G T A C G T A C T G T C A G C G T A A G T C A C G T A C G T C G A T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.66
Offset:7
Orientation:forward strand
Alignment:GGTTGGACTTTGT
-------CTTTGT
 A T C G A C T G A C G T A C G T A C T G T C A G C G T A A G T C A C G T A C G T C G A T A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGTTGGACTTTGT
--CTGACCTTTG-
 A T C G A C T G A C G T A C G T A C T G T C A G C G T A A G T C A C G T A C G T C G A T A C T G A G C T
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GGTTGGACTTTGT---
------CCWTTGTYYB
 A T C G A C T G A C G T A C G T A C T G T C A G C G T A A G T C A C G T A C G T C G A T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTTGGACTTTGT------
--TNNTCCTTTGTTCTNNT
 A T C G A C T G A C G T A C G T A C T G T C A G C G T A A G T C A C G T A C G T C G A T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GGTTGGACTTTGT---
------YCTTTGTTCC
 A T C G A C T G A C G T A C G T A C T G T C A G C G T A A G T C A C G T A C G T C G A T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GGTTGGACTTTGT---
------CCTTTGTTTT
 A T C G A C T G A C G T A C G T A C T G T C A G C G T A A G T C A C G T A C G T C G A T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T