Information for 8-TGGACTTTTGACC (Motif 14)

A C G T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C T G C G T A T G A C A G T C
Reverse Opposite:
A C T G A C T G C G A T A G T C G T C A C G T A C G T A C G T A A T C G A C G T A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.901e+01
Information Content per bp:1.927
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets29.5 +/- 10.7bp
Average Position of motif in Background60.3 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTTGACC
NNATTGGACTTTNGNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C T G C G T A T G A C A G T C
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TGGACTTTTGACC--
TTGACCTTTTGACCTT
 A C G T A C G T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C T G C G T A T G A C A G T C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Rarb/MA0857.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTTGACC---
TGACCTTTTGACCTTT
 A C G T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C T G C G T A T G A C A G T C A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTTGACC---
TGGACTTTGNNCTNTG
 A C G T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C T G C G T A T G A C A G T C A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTTGACC--
TGGACTTTGNNCTCN
 A C G T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C T G C G T A T G A C A G T C A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGGACTTTTGACC---
GTTGACCTTTGACCTTT
 A C G T A C G T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C T G C G T A T G A C A G T C A C G T A C G T A C G T
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTTGACC--
TGACCTTTTGACCTC
 A C G T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C T G C G T A T G A C A G T C A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

RARA/MA0729.1/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TGGACTTTTGACC--
CATTGACCTTTTGACCTC
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C T G C G T A T G A C A G T C A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTTTTGACC-
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C T G C G T A T G A C A G T C A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGGACTTTTGACC--
-TGACCTTTGACCCC
 A C G T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C T G C G T A T G A C A G T C A C G T A C G T
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C