Information for 4-AAAATTTTCAGTCAAY (Motif 10)

C G T A G T C A C G T A G T C A A C G T A C G T A C G T C G A T A G T C C G T A A T C G A C G T A T G C C G T A C G T A A G C T
Reverse Opposite:
T C A G A C G T C G A T A T C G G T C A A T G C A C G T C T A G C G T A C G T A G T C A C G T A A C G T C G A T A C G T A C G T
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.792
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 26.5bp
Average Position of motif in Background34.6 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AAAATTTTCAGTCAAY
NNCNNAACAATTNT--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A G T C A A C G T A C G T A C G T C G A T A G T C C G T A A T C G A C G T A T G C C G T A C G T A A G C T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAAATTTTCAGTCAAY--
---NANTTCATTGAATTA
 C G T A G T C A C G T A G T C A A C G T A C G T A C G T C G A T A G T C C G T A A T C G A C G T A T G C C G T A C G T A A G C T A C G T A C G T
A C G T A C G T A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAAATTTTCAGTCAAY--
---ATTTGCATACAATGG
 C G T A G T C A C G T A G T C A A C G T A C G T A C G T C G A T A G T C C G T A A T C G A C G T A T G C C G T A C G T A A G C T A C G T A C G T
A C G T A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAAATTTTCAGTCAAY
GGAAAAATTGTTAGGAA--
 A C G T A C G T A C G T C G T A G T C A C G T A G T C A A C G T A C G T A C G T C G A T A G T C C G T A A T C G A C G T A T G C C G T A C G T A A G C T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A A C G T A C G T

PB0075.1_Sp100_1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AAAATTTTCAGTCAAY-
---ATTTTCCGNNAAAT
 C G T A G T C A C G T A G T C A A C G T A C G T A C G T C G A T A G T C C G T A A T C G A C G T A T G C C G T A C G T A A G C T A C G T
A C G T A C G T A C G T G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T

SOX8/MA0868.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAAATTTTCAGTCAAY
AACAATGTGCAGTGTT-
 A C G T C G T A G T C A C G T A G T C A A C G T A C G T A C G T C G A T A G T C C G T A A T C G A C G T A T G C C G T A C G T A A G C T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AAAATTTTCAGTCAAY
GAAAAAATTGCAAGG---
 A C G T A C G T C G T A G T C A C G T A G T C A A C G T A C G T A C G T C G A T A G T C C G T A A T C G A C G T A T G C C G T A C G T A A G C T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AAAATTTTCAGTCAAY
--ATTTTCCATT----
 C G T A G T C A C G T A G T C A A C G T A C G T A C G T C G A T A G T C C G T A A T C G A C G T A T G C C G T A C G T A A G C T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AAAATTTTCAGTCAAY
CTAATATTGCTAAA----
 A C G T A C G T C G T A G T C A C G T A G T C A A C G T A C G T A C G T C G A T A G T C C G T A A T C G A C G T A T G C C G T A C G T A A G C T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AAAATTTTCAGTCAAY
CTAATATTGCTAAA----
 A C G T A C G T C G T A G T C A C G T A G T C A A C G T A C G T A C G T C G A T A G T C C G T A A T C G A C G T A T G C C G T A C G T A A G C T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T A C G T A C G T A C G T