Information for 7-TGCAGCCAAATGA (Motif 7)

A C G T C A T G T A G C G C T A T C A G A T G C A T G C C G T A C T G A C G T A A G C T A C T G G T C A
Reverse Opposite:
A C G T G T A C C T G A G C A T A G C T C G A T A T C G A T C G A G T C C G A T A T C G G A T C G T C A
p-value:1e-23
log p-value:-5.430e+01
Information Content per bp:1.695
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.3 +/- 25.1bp
Average Position of motif in Background50.2 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGCAGCCAAATGA
---TGCCAA----
 A C G T C A T G T A G C G C T A T C A G A T G C A T G C C G T A C T G A C G T A A G C T A C T G G T C A
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCAGCCAAATGA
-CGTGCCAAG---
 A C G T C A T G T A G C G C T A T C A G A T G C A T G C C G T A C T G A C G T A A G C T A C T G G T C A
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCAGCCAAATGA
--ATGCCAGACN-
 A C G T C A T G T A G C G C T A T C A G A T G C A T G C C G T A C T G A C G T A A G C T A C T G G T C A
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TGCAGCCAAATGA
-----CCATATGT
 A C G T C A T G T A G C G C T A T C A G A T G C A T G C C G T A C T G A C G T A A G C T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGCAGCCAAATGA-
----TCCAGATGTT
 A C G T C A T G T A G C G C T A T C A G A T G C A T G C C G T A C T G A C G T A A G C T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCAGCCAAATGA--
--CATCCAGATGTTC
 A C G T C A T G T A G C G C T A T C A G A T G C A T G C C G T A C T G A C G T A A G C T A C T G G T C A A C G T A C G T
A C G T A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCAGCCAAATGA-----
-AAGGCCAGATGGTCCGG
 A C G T C A T G T A G C G C T A T C A G A T G C A T G C C G T A C T G A C G T A A G C T A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGCAGCCAAATGA-
--VNAVCAGCTGGC
 A C G T C A T G T A G C G C T A T C A G A T G C A T G C C G T A C T G A C G T A A G C T A C T G G T C A A C G T
A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGCAGCCAAATGA-
--NNVVCAGCTGBN
 A C G T C A T G T A G C G C T A T C A G A T G C A T G C C G T A C T G A C G T A A G C T A C T G G T C A A C G T
A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TGCAGCCAAATGA
YTAATTRAWWCCAGATGT
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C G C T A T C A G A T G C A T G C C G T A C T G A C G T A A G C T A C T G G T C A
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T