Information for 25-GCGCGCTGTT (Motif 38)

A C T G A G T C A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C
p-value:1e-5
log p-value:-1.260e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets40.4 +/- 21.0bp
Average Position of motif in Background43.6 +/- 7.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GCGCGCTGTT--
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GCGCGCTGTT--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCGCGCTGTT
GGCGCGCT---
 A C G T A C T G A G T C A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C G T
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCGCGCTGTT--
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCTGTT------
AAGACGCTGTAAAGCGA
 A C G T A C T G A G T C A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCTGTT------
AAGACGCTGTAAAGCGA
 A C G T A C T G A G T C A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCTGTT------
AGGACGCTGTAAAGGGA
 A C G T A C T G A G T C A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCGCGCTGTT
----GCTGTG
 A C T G A G T C A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGCGCTGTT-
-CCTGCTGAGH
 A C T G A G T C A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCGCTGTT--
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G