p-value: | 1e-8 |
log p-value: | -2.048e+01 |
Information Content per bp: | 1.807 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 1.05% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 47.1 +/- 27.6bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer
Match Rank: | 1 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TACAAGTCTGTGA- ----AAGGTGTKAA |
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Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
Match Rank: | 2 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TACAAGTCTGTGA GGGGCTYGKCTGGGA |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 3 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TACAAGTCTGTGA ---TWGTCTGV-- |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TACAAGTCTGTGA ------GCTGTG- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TACAAGTCTGTGA--- ----TGTCTGDCACCT |
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PH0082.1_Irx2/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TACAAGTCTGTGA TAAATACATGTAAAATT |
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Nr2e3/MA0164.1/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TACAAGTCTGTGA ---AAGCTTG--- |
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Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TACAAGTCTGTGA--- ------CSTGGGAAAD |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TACAAGTCTGTGA -VBSYGTCTGG-- |
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PB0130.1_Gm397_2/Jaspar
Match Rank: | 10 |
Score: | 0.50 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TACAAGTCTGTGA---- -NNGCGTGTGTGCNGCN |
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