Information for 7-CTAGAGAGGC (Motif 6)

T G A C A G C T C T G A A C T G G T C A T A C G G T C A C T A G C A T G G T A C
Reverse Opposite:
A C T G G T A C G A T C C A G T A T G C A C G T G T A C A G C T C T G A A C T G
p-value:1e-16
log p-value:-3.884e+01
Information Content per bp:1.824
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif172.4
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets46.1 +/- 20.1bp
Average Position of motif in Background50.6 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTAGAGAGGC-
CTTGAGTGGCT
 T G A C A G C T C T G A A C T G G T C A T A C G G T C A C T A G C A T G G T A C A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTAGAGAGGC
BTBRAGTGSN
 T G A C A G C T C T G A A C T G G T C A T A C G G T C A C T A G C A T G G T A C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTAGAGAGGC
CTYRAGTGSY
 T G A C A G C T C T G A A C T G G T C A T A C G G T C A C T A G C A T G G T A C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTAGAGAGGC-
-TTGAGTGSTT
 T G A C A G C T C T G A A C T G G T C A T A C G G T C A C T A G C A T G G T A C A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTAGAGAGGC
CGTCTAGACA---
 A C G T A C G T A C G T T G A C A G C T C T G A A C T G G T C A T A C G G T C A C T A G C A T G G T A C
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTAGAGAGGC
TTTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T T G A C A G C T C T G A A C T G G T C A T A C G G T C A C T A G C A T G G T A C
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CTAGAGAGGC
GRTGMTRGAGCC--
 A C G T A C G T A C G T A C G T T G A C A G C T C T G A A C T G G T C A T A C G G T C A C T A G C A T G G T A C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------CTAGAGAGGC
NNNATTCCTCGAAAGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G C T C T G A A C T G G T C A T A C G G T C A C T A G C A T G G T A C
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTAGAGAGGC-
-TTRAGTGSYK
 T G A C A G C T C T G A A C T G G T C A T A C G G T C A C T A G C A T G G T A C A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------CTAGAGAGGC
BCNGGTTCTAGANCN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G C T C T G A A C T G G T C A T A C G G T C A C T A G C A T G G T A C
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T A C G T