Information for 17-ACTGCTGCTC (Motif 19)

G C T A G A T C A G C T A T C G A G T C G A C T T A C G A T G C G A C T G A T C
Reverse Opposite:
C T A G C T G A T A C G A T G C C T G A T C A G T A G C T C G A C T A G C G A T
p-value:1e-8
log p-value:-1.891e+01
Information Content per bp:1.657
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.71%
Number of Background Sequences with motif1347.5
Percentage of Background Sequences with motif2.89%
Average Position of motif in Targets54.3 +/- 25.0bp
Average Position of motif in Background49.7 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACTGCTGCTC
AGCAGCTGCT-
 A C G T G C T A G A T C A G C T A T C G A G T C G A C T T A C G A T G C G A C T G A T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACTGCTGCTC
-CAGCTGNT-
 G C T A G A T C A G C T A T C G A G T C G A C T T A C G A T G C G A C T G A T C
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ACTGCTGCTC-
AGCAGCTGCTNN
 A C G T G C T A G A T C A G C T A T C G A G T C G A C T T A C G A T G C G A C T G A T C A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ACTGCTGCTC---
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T G C T A G A T C A G C T A T C G A G T C G A C T T A C G A T G C G A C T G A T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACTGCTGCTC
ACAGCTGTTV
 G C T A G A T C A G C T A T C G A G T C G A C T T A C G A T G C G A C T G A T C
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACTGCTGCTC
NCAGCTGCTG
 G C T A G A T C A G C T A T C G A G T C G A C T T A C G A T G C G A C T G A T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACTGCTGCTC
AACAGCTGCAG
 A C G T G C T A G A T C A G C T A T C G A G T C G A C T T A C G A T G C G A C T G A T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACTGCTGCTC
GACAGCTGCAG
 A C G T G C T A G A T C A G C T A T C G A G T C G A C T T A C G A T G C G A C T G A T C
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACTGCTGCTC
AACAGCTG---
 A C G T G C T A G A T C A G C T A T C G A G T C G A C T T A C G A T G C G A C T G A T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACTGCTGCTC
NGNGACAGCTGCN-
 A C G T A C G T A C G T A C G T G C T A G A T C A G C T A T C G A G T C G A C T T A C G A T G C G A C T G A T C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T