Information for 3-AAGTTAAAGTTTAACT (Motif 6)

G T C A C T G A A C T G C A G T A C G T T G C A C G T A C G T A A T C G C A G T G A C T A C G T G T C A C T G A A T G C G C A T
Reverse Opposite:
C G T A T A C G A G C T C A G T T G C A C T G A G T C A A T G C C G A T G C A T A C G T T C G A G T C A G T A C G A C T C A G T
p-value:1e-14
log p-value:-3.373e+01
Information Content per bp:1.664
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.9 +/- 20.0bp
Average Position of motif in Background48.1 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AAGTTAAAGTTTAACT
---TTAATGTTTAACC
 G T C A C T G A A C T G C A G T A C G T T G C A C G T A C G T A A T C G C A G T G A C T A C G T G T C A C T G A A T G C G C A T
A C G T A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAGTTAAAGTTTAACT
AAAGGTCAAAGGTCAAC-
 A C G T A C G T G T C A C T G A A C T G C A G T A C G T T G C A C G T A C G T A A T C G C A G T G A C T A C G T G T C A C T G A A T G C G C A T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAGTTAAAGTTTAACT
GAAAGTGAAAGT------
 A C G T A C G T G T C A C T G A A C T G C A G T A C G T T G C A C G T A C G T A A T C G C A G T G A C T A C G T G T C A C T G A A T G C G C A T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGTTAAAGTTTAACT
-AGGTCAAGGTCA---
 G T C A C T G A A C T G C A G T A C G T T G C A C G T A C G T A A T C G C A G T G A C T A C G T G T C A C T G A A T G C G C A T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGTTAAAGTTTAACT
AGAAAGTGAAAGTGA----
 A C G T A C G T A C G T G T C A C T G A A C T G C A G T A C G T T G C A C G T A C G T A A T C G C A G T G A C T A C G T G T C A C T G A A T G C G C A T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGTTAAAGTTTAACT
-NGTTAATNATTAACN
 G T C A C T G A A C T G C A G T A C G T T G C A C G T A C G T A A T C G C A G T G A C T A C G T G T C A C T G A A T G C G C A T
A C G T C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGTTAAAGTTTAACT
GAGGTCAAAGGTCA---
 A C G T G T C A C T G A A C T G C A G T A C G T T G C A C G T A C G T A A T C G C A G T G A C T A C G T G T C A C T G A A T G C G C A T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGTTAAAGTTTAACT
AAGTTCAAGGTCAGC-
 G T C A C T G A A C T G C A G T A C G T T G C A C G T A C G T A A T C G C A G T G A C T A C G T G T C A C T G A A T G C G C A T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGTTAAAGTTTAACT
GAGGTCAAAGGTCA---
 A C G T G T C A C T G A A C T G C A G T A C G T T G C A C G T A C G T A A T C G C A G T G A C T A C G T G T C A C T G A A T G C G C A T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGTTAAAGTTTAACT
GGGGTCAAAGTCCAAT-
 A C G T G T C A C T G A A C T G C A G T A C G T T G C A C G T A C G T A A T C G C A G T G A C T A C G T G T C A C T G A A T G C G C A T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T