Information for 12-AGGGAGCGAA (Motif 21)

G T C A C T A G A C T G A C T G G C T A A T C G T G A C C A T G G T C A C G T A
Reverse Opposite:
A C G T A C G T G T A C A C T G A T G C C A G T A G T C A G T C A G T C A C G T
p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.852
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif66.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets54.3 +/- 27.8bp
Average Position of motif in Background54.0 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGGGAGCGAA
-CGGAGC---
 G T C A C T A G A C T G A C T G G C T A A T C G T G A C C A T G G T C A C G T A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGGGAGCGAA--
-GGGCGGGAAGG
 G T C A C T A G A C T G A C T G G C T A A T C G T G A C C A T G G T C A C G T A A C G T A C G T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGGAGCGAA---
-TGGCGGGAAAHB
 G T C A C T A G A C T G A C T G G C T A A T C G T G A C C A T G G T C A C G T A A C G T A C G T A C G T
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGGAGCGAA----
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T G T C A C T A G A C T G A C T G G C T A A T C G T G A C C A T G G T C A C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGGAGCGAA
AAGGTGTKAA
 G T C A C T A G A C T G A C T G G C T A A T C G T G A C C A T G G T C A C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGGAGCGAA--
RGGGCACTAACY
 G T C A C T A G A C T G A C T G G C T A A T C G T G A C C A T G G T C A C G T A A C G T A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGGAGCGAA
CWGGCGGGAA
 G T C A C T A G A C T G A C T G G C T A A T C G T G A C C A T G G T C A C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGGAGCGAA--
-GGGCGGGAAGG
 G T C A C T A G A C T G A C T G G C T A A T C G T G A C C A T G G T C A C G T A A C G T A C G T
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGGGAGCGAA---
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T G T C A C T A G A C T G A C T G G C T A A T C G T G A C C A T G G T C A C G T A A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGGAGCGAA-
BTKGGCGGGAAA
 A C G T G T C A C T A G A C T G A C T G G C T A A T C G T G A C C A T G G T C A C G T A A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A