Information for 3-TTGACAAATATTAGCT (Motif 5)

A C G T A C G T C T A G T C G A A G T C C T G A G T C A G T C A A C G T C G T A A C G T G A C T G C T A C T A G A G T C A G C T
Reverse Opposite:
C T G A C T A G G A T C C G A T C T G A T C G A G A C T T C G A A C G T A C G T A G C T C T A G A C G T A G T C G T C A T G C A
p-value:1e-16
log p-value:-3.796e+01
Information Content per bp:1.678
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.8 +/- 21.5bp
Average Position of motif in Background41.5 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGACAAATATTAGCT
NNTNNCAATATTAG--
 A C G T A C G T C T A G T C G A A G T C C T G A G T C A G T C A A C G T C G T A A C G T G A C T G C T A C T A G A G T C A G C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGACAAATATTAGCT
NNTNNCAATATTAG--
 A C G T A C G T C T A G T C G A A G T C C T G A G T C A G T C A A C G T C G T A A C G T G A C T G C T A C T A G A G T C A G C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTGACAAATATTAGCT
--GACATATGTT----
 A C G T A C G T C T A G T C G A A G T C C T G A G T C A G T C A A C G T C G T A A C G T G A C T G C T A C T A G A G T C A G C T
A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTGACAAATATTAGCT
TTGACAG---------
 A C G T A C G T C T A G T C G A A G T C C T G A G T C A G T C A A C G T C G T A A C G T G A C T G C T A C T A G A G T C A G C T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TTGACAAATATTAGCT
GTATTGACAGCTNNTT---
 A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C T G A G T C A G T C A A C G T C G T A A C G T G A C T G C T A C T A G A G T C A G C T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TTGACAAATATTAGCT
GTATTGACAGGTNNTT---
 A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C T G A G T C A G T C A A C G T C G T A A C G T G A C T G C T A C T A G A G T C A G C T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTGACAAATATTAGCT
NNNTAACAATTATAN---
 A C G T A C G T A C G T A C G T C T A G T C G A A G T C C T G A G T C A G T C A A C G T C G T A A C G T G A C T G C T A C T A G A G T C A G C T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTGACAAATATTAGCT
-TGACAGCTGTCA---
 A C G T A C G T C T A G T C G A A G T C C T G A G T C A G T C A A C G T C G T A A C G T G A C T G C T A C T A G A G T C A G C T
A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTGACAAATATTAGCT
WAAGTAAAYA------
 A C G T A C G T C T A G T C G A A G T C C T G A G T C A G T C A A C G T C G T A A C G T G A C T G C T A C T A G A G T C A G C T
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TTGACAAATATTAGCT-
-----GAATGTTTGTTT
 A C G T A C G T C T A G T C G A A G T C C T G A G T C A G T C A A C G T C G T A A C G T G A C T G C T A C T A G A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T