Information for 4-WRTGTAAACA (Motif 3)

G C A T C T A G C G A T C T A G A G C T G T C A C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T T C A G C G A T A C G T A C G T T C G A G A T C G C T A G A T C C G T A
p-value:1e-34
log p-value:-8.042e+01
Information Content per bp:1.661
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif14.44%
Number of Background Sequences with motif1822.0
Percentage of Background Sequences with motif3.80%
Average Position of motif in Targets50.7 +/- 23.6bp
Average Position of motif in Background49.6 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:1
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--WRTGTAAACA---
NCWRWGTAAACANSV
 A C G T A C G T G C A T C T A G C G A T C T A G A G C T G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:WRTGTAAACA--
TATGTAAACANG
 G C A T C T A G C G A T C T A G A G C T G T C A C G T A C G T A A G T C C G T A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.93
Offset:0
Orientation:forward strand
Alignment:WRTGTAAACA
AAAGTAAACA
 G C A T C T A G C G A T C T A G A G C T G T C A C G T A C G T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--WRTGTAAACA
NCTAAGTAAACA
 A C G T A C G T G C A T C T A G C G A T C T A G A G C T G T C A C G T A C G T A A G T C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-WRTGTAAACA----
CAAAGTAAACANNNN
 A C G T G C A T C T A G C G A T C T A G A G C T G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXD2/MA0847.1/Jaspar

Match Rank:6
Score:0.93
Offset:3
Orientation:forward strand
Alignment:WRTGTAAACA
---GTAAACA
 G C A T C T A G C G A T C T A G A G C T G T C A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A

FOXO4/MA0848.1/Jaspar

Match Rank:7
Score:0.93
Offset:3
Orientation:forward strand
Alignment:WRTGTAAACA
---GTAAACA
 G C A T C T A G C G A T C T A G A G C T G T C A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T T C A G C G A T T G C A G T C A C T G A G A T C C G T A

FOXL1/MA0033.2/Jaspar

Match Rank:8
Score:0.93
Offset:3
Orientation:forward strand
Alignment:WRTGTAAACA
---GTAAACA
 G C A T C T A G C G A T C T A G A G C T G T C A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.92
Offset:0
Orientation:forward strand
Alignment:WRTGTAAACA
AAAGTAAACA
 G C A T C T A G C G A T C T A G A G C T G T C A C G T A C G T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:10
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:WRTGTAAACA---
-ATGTAAACADGS
 G C A T C T A G C G A T C T A G A G C T G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C