Information for 9-GCCCYGGCCCTGGCCC (Motif 17)

T A C G T A G C G T A C A G T C G A T C A C T G A C T G G T A C G T A C A G T C G A C T A C T G A T C G A T G C A G T C G T A C
Reverse Opposite:
C A T G A C T G T A C G A T G C A G T C C T G A A C T G A C T G A C T G G T A C A G T C C T A G C T A G A C T G A T C G A G T C
p-value:1e-7
log p-value:-1.734e+01
Information Content per bp:1.762
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif37.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets60.1 +/- 22.3bp
Average Position of motif in Background51.2 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCCCYGGCCCTGGCCC-
---CAGGCCNNGGCCNN
 T A C G T A G C G T A C A G T C G A T C A C T G A C T G G T A C G T A C A G T C G A C T A C T G A T C G A T G C A G T C G T A C A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GCCCYGGCCCTGGCCC-
-----GGCCCCGCCCCC
 T A C G T A G C G T A C A G T C G A T C A C T G A C T G G T A C G T A C A G T C G A C T A C T G A T C G A T G C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCCYGGCCCTGGCCC--
--CTTGGCANNNTGCCAA
 T A C G T A G C G T A C A G T C G A T C A C T G A C T G G T A C G T A C A G T C G A C T A C T G A T C G A T G C A G T C G T A C A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCCYGGCCCTGGCCC
GCCCCGCCCCCTCCC-
 T A C G T A G C G T A C A G T C G A T C A C T G A C T G G T A C G T A C A G T C G A C T A C T G A T C G A T G C A G T C G T A C
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCCCYGGCCCTGGCCC
----AGGCCTAG----
 T A C G T A G C G T A C A G T C G A T C A C T G A C T G G T A C G T A C A G T C G A C T A C T G A T C G A T G C A G T C G T A C
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCCCYGGCCCTGGCCC
-TCCCAGMCRAGCCCC
 T A C G T A G C G T A C A G T C G A T C A C T G A C T G G T A C G T A C A G T C G A C T A C T G A T C G A T G C A G T C G T A C
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCCCYGGCCCTGGCCC-
---NTGCCCTTGGGCGN
 T A C G T A G C G T A C A G T C G A T C A C T G A C T G G T A C G T A C A G T C G A C T A C T G A T C G A T G C A G T C G T A C A C G T
A C G T A C G T A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCCCYGGCCCTGGCCC
----TGACCTTGACCT
 T A C G T A G C G T A C A G T C G A T C A C T G A C T G G T A C G T A C A G T C G A C T A C T G A T C G A T G C A G T C G T A C
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCCCYGGCCCTGGCCC----
---TAAGCCACGCCCCCTTT
 T A C G T A G C G T A C A G T C G A T C A C T G A C T G G T A C G T A C A G T C G A C T A C T G A T C G A T G C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCCCYGGCCCTGGCCC
GCCCCGCCCCC-----
 T A C G T A G C G T A C A G T C G A T C A C T G A C T G G T A C G T A C A G T C G A C T A C T G A T C G A T G C A G T C G T A C
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T