Information for 8-GTTTGCTTAACAA (Motif 10)

A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T C G T A C G T A G T A C C T G A C G T A
Reverse Opposite:
A C G T G A C T C A T G C G A T C G A T C T G A C T G A A C T G G T A C C G T A C G T A C G T A A G T C
p-value:1e-10
log p-value:-2.474e+01
Information Content per bp:1.906
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.6 +/- 19.1bp
Average Position of motif in Background44.6 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTTTGCTTAACAA--
ATTTGCATAACAATG
 A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T C G T A C G T A G T A C C T G A C G T A A C G T A C G T
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTTTGCTTAACAA--
ATTTGCATAACAAAG
 A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T C G T A C G T A G T A C C T G A C G T A A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTTTGCTTAACAA
TRTTTACTTW----
 A C G T A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T C G T A C G T A G T A C C T G A C G T A
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGCTTAACAA
TGTTTACTTT----
 A C G T A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T C G T A C G T A G T A C C T G A C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGCTTAACAA
TGTTTACTTT----
 A C G T A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T C G T A C G T A G T A C C T G A C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTTGCTTAACAA
ATTTGCATAA---
 A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T C G T A C G T A G T A C C T G A C G T A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GTTTGCTTAACAA
TCCATGTTTACTTTG---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T C G T A C G T A G T A C C T G A C G T A
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGCTTAACAA-
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T C G T A C G T A G T A C C T G A C G T A A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGCTTAACAA
TTTGTTTACTTA----
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T C G T A C G T A G T A C C T G A C G T A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTTGCTTAACAA
ATTTGCATAT---
 A C T G A C G T A C G T A C G T A C T G A G T C A G C T A G C T C G T A C G T A G T A C C T G A C G T A
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T