Information for 17-CCTGCAGGGA (Motif 25)

T G A C G T A C A G C T T A C G G T A C T G C A A C T G A C T G A T C G T C G A
Reverse Opposite:
A G C T T A G C A G T C G T A C A C G T A C T G A T G C T C G A A C T G A C T G
p-value:1e-7
log p-value:-1.808e+01
Information Content per bp:1.817
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.27%
Number of Background Sequences with motif684.8
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets58.0 +/- 22.5bp
Average Position of motif in Background49.2 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCAGGGA
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T T G A C G T A C A G C T T A C G G T A C T G C A A C T G A C T G A T C G T C G A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGGGA
CCCCCTGCTGTG-
 A C G T A C G T A C G T T G A C G T A C A G C T T A C G G T A C T G C A A C T G A C T G A T C G T C G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGGGA--
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T T G A C G T A C A G C T T A C G G T A C T G C A A C T G A C T G A T C G T C G A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGGGA--
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T T G A C G T A C A G C T T A C G G T A C T G C A A C T G A C T G A T C G T C G A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCTGCAGGGA
CCTGCTGAGH
 T G A C G T A C A G C T T A C G G T A C T G C A A C T G A C T G A T C G T C G A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGGGA--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T T G A C G T A C A G C T T A C G G T A C T G C A A C T G A C T G A T C G T C G A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGGGA--
NTCCCCTCAGGGANT
 A C G T A C G T A C G T T G A C G T A C A G C T T A C G G T A C T G C A A C T G A C T G A T C G T C G A A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCAGGGA
TGCCCNGGGGCA
 A C G T A C G T T G A C G T A C A G C T T A C G G T A C T G C A A C T G A C T G A T C G T C G A
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTGCAGGGA
TGCCCCAGGGCA
 A C G T A C G T T G A C G T A C A G C T T A C G G T A C T G C A A C T G A C T G A T C G T C G A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGGGA----
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T T G A C G T A C A G C T T A C G G T A C T G C A A C T G A C T G A T C G T C G A A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T